Author

M. Koyama

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 2 Bioengineering· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Approach:experimental assay· 3 Organism:human· 3 Organism:zebrafish· 3 Research Focus:cell signaling & trafficking· 2 Assay:fluorescence / live-cell microscopy· 2 Organism:mouse· 2 Research Focus:chromatin & epigenetic regulation· 1

Frequent Co-Authors

J. Shea· 3 shared A. Haque· 1 shared A. Pasolli· 1 shared A. S. Abdelfattah· 1 shared A. Varelias· 1 shared B. Rawal· 1 shared C. G. Williams· 1 shared D. S. Kim· 1 shared

Activity by Year

2017-2020 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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3 shared papersBiophysics

J. Shea

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Single-cell transcriptomics of allo-reactive CD4+ T cells over time reveals divergent fates during gut GVHD

J. A. Engel, H. J. Lee, C. G. Williams, R. Kuns, S. Olver, L. I. M. Lansink, M. S. F. Soon, S. B. Andersen, J. E. Powell, V. Svensson, S. A. Teichmann, G. R. Hill, A. Varelias, M. Koyama, A. Haque

This study uses single-cell RNA sequencing to track the differentiation of allo-reactive CD4+ T cells during gut GVHD, revealing divergent fates into quiescent and effector states.

bioRxiv · Mar 8, 2020Immunology

In vivo glucose imaging in multiple model organisms with an engineered single-wavelength sensor

J. P. Keller, J. S. Marvin, H. Lacin, W. C. Lemon, J. Shea, S. Kim, R. T. Lee, M. Koyama, P. J. Keller, L. Looger

This paper develops a genetically encoded glucose sensor for in vivo imaging across multiple organisms, revealing novel glucose dynamics in neurons, astrocytes, and zebrafish.

bioRxiv · Mar 8, 2019 · PreprintBioengineering

A genetically encoded Ca2+ indicator based on circularly permutated sea anemone red fluorescent protein

Y. Shen, H. Dana, A. S. Abdelfattah, R. Patel, J. Shea, R. S. Molina, B. Rawal, V. Rancic, Y.-F. Chang, L. Wu, Y. Chen, Y. Qian, M. D. Wiens, N. Hambleton, K. Ballanyi, , R. E. Campbell

The paper develops and validates a new red fluorescent calcium indicator, K-GECO1, based on a circularly permutated RFP from a sea anemone, tested across multiple cell types and organisms.

bioRxiv · Nov 2, 2017Biophysics

Visualizing Long-Term Single-Molecule Dynamics in vivo by Stochastic Protein Labeling

H. Liu, P. Dong, M. S. Ioannou, L. Li, J. Shea, A. Pasolli, J. Grimm, P. Rivlin, L. D. Lavis, M. Koyama, Z. Liu

This paper introduces a genetic strategy for sparse protein labeling in live cells, enabling long-term single-molecule tracking and revealing new insights into molecular dynamics in vivo.

bioRxiv · Jun 12, 2017Biophysics