Author

Neil Weisenfeld

10X Genomics (United States)

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Genomics· 2 Neuroscience· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:differential expression· 2 Approach:experimental assay· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Assay:bulk RNA-seq· 1 Research Focus:gene regulatory network inference· 1 Research Focus:genome assembly· 1 Organism:human· 1

Frequent Co-Authors

Stephen R. WilliamsiD· 3 shared David B. JaffeiD· 2 shared Deanna M. ChurchiD· 2 shared Adam FrankishiD· 1 shared Ahmed Essam MahfouziD· 1 shared Alexander N. SteiniD· 1 shared Alexei StortchevoiiD· 1 shared Allen Van DeynzeiD· 1 shared

Activity by Year

2018-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 23 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersGenomics

Stephen R. WilliamsORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Cell-type, single-cell, and spatial signatures of brain-region specific splicing in postnatal development

Anoushka Joglekar, Andrey D. Prjibelski, Ahmed Essam Mahfouz, Paul G. Collier, Susan Lin, Anna Katharina Schlusche, Jordan Marrocco, Stephen R. Williams, Bettina Haase, Ashley Hayes, Jennifer G. Chew, Neil Weisenfeld, Man Ying Wong, Alexander N. Stein, Simon A. Hardwick, , Hagen Tilgner

The paper identifies brain-region specific splicing patterns at single-cell and spatial resolution in postnatal mice, revealing cell-type specific and region-specific isoform expression.

Nature Communications · Jan 19, 2021Peer-reviewedNeuroscience

Reference Quality Assembly of the 3.5 Gb genome of Capsicum annuum from a Single Linked-Read Library

Amanda M. Hulse‐Kemp, Shamoni Maheshwari, Kevin M. Stoffel, Theresa A. Hill, David B. Jaffe, Stephen R. Williams, Neil Weisenfeld, Srividya Ramakrishnan, Vijay Kumar, Preyas Shah, Michael C. Schatz, Deanna M. Church, Allen Van Deynze

This study uses Linked-Read sequencing to assemble a high-quality, contiguous reference genome for Capsicum annuum, demonstrating its utility for complex plant genomes.

Horticulture Research · Jan 12, 2018Peer-reviewedGenomics

Dissecting the Causal Mechanism of X-Linked Dystonia-Parkinsonism by Integrating Genome and Transcriptome Assembly

Tatsiana Aneichyk, William T. J. Hendriks, Rachita Yadav, David S. Shin, Dadi Gao, Christine A. Vaine, Ryan L. Collins, Aloysius Domingo, Benjamin Currall, Alexei Stortchevoi, Trisha Multhaupt‐Buell, Ellen B. Penney, Lilian Cruz, Jyotsna Dhakal, Harrison Brand, , Michael E. Talkowski

This study identifies the causal mechanism of X-linked Dystonia-Parkinsonism (XDP) by integrating genome and transcriptome assembly, revealing a SVA insertion causing intron retention and TAF1 dysfunction.

Cell · Jan 1, 2018Peer-reviewedGenomics