Author

P. Jakka

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Biophysics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:host-pathogen & immune response· 2 Organism:chicken / avian· 1 Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Organism:human· 1 Organism:non-human primate· 1 Assay:protein sequence· 1

Frequent Co-Authors

A. Gontu· 2 shared R. H. Nissly· 2 shared S. K. Chothe· 2 shared S. Ramasamy· 2 shared S. V. Kuchipudi· 2 shared C. Chen· 1 shared C. D. Maranas· 1 shared K. J. Vandegrift· 1 shared

Activity by Year

2022-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 41 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersMicrobiology

A. Gontu

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Comparative analysis of serological assays and sero-surveillance for SARS-CoV-2 exposure in US cattle

S. Ramasamy, M. Qureshi, S. Mukherjee, S. Mahajan, L. C. LaBella, S. K. Chothe, P. Jakka, A. Gontu, S. Misra, M. Surendiran-Nair, R. H. Nissly, S. V. Kuchipudi

This study evaluates serological assays for SARS-CoV-2 in US cattle, finding no evidence of natural infection or transmission and highlighting issues with false positives in neutralization assays.

bioRxiv · Apr 3, 2024 · PreprintMicrobiology

A CNN model for predicting binding affinity changes between SARS-CoV-2 spike RBD variants and ACE2 homologues

C. Chen, V. S. Boorla, R. Chowdhury, R. H. Nissly, A. Gontu, S. K. Chothe, L. LaBella, P. Jakka, S. Ramasamy, K. J. Vandegrift, M. Surendran Nair, S. V. Kuchipudi, C. D. Maranas

The paper introduces a CNN model to predict RBD-hACE2 binding affinity changes for SARS-CoV-2 variants, achieving high accuracy and identifying variants with improved binding affinity.

bioRxiv · Mar 22, 2022 · PreprintBiophysics