Author

S. Satpathy

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 4 Biochemistry· 3 Microbiology· 1 Pharmacology & Toxicology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 6 Organism:human· 6 Assay:proteomics· 5 Research Focus:cell signaling & trafficking· 3 Research Focus:cell type annotation· 3 Research Focus:differential expression· 3 Research Focus:protein folding & dynamics· 3 Approach:statistical model· 3

Frequent Co-Authors

S. A. Carr· 4 shared D. R. Mani· 2 shared H. Mumme· 2 shared K. Krug· 2 shared M. Bhasin· 2 shared N. D. Udeshi· 2 shared A. B. Saltzman· 1 shared A. Gao· 1 shared

Activity by Year

2019-2024 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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4 shared papersBiochemistry

S. A. Carr

Mutual co-authors in cluster

Author profile →

9 papers

Recent·Most cited

Single-cell analysis of pediatric acute myeloid leukemia samples uncovers treatment-resistant stem and mast cells

D. Ohlstrom, M. Bakhtia, H. Mumme, M. Michaud, F. Chien, W. Pilcher, S. Satpathy, S. Jordan, S. Bhasin, M. Bhasin

This study uses single-cell RNA sequencing to identify treatment-resistant subtypes and mast cell-like cells in pediatric AML, linking them to poor outcomes.

bioRxiv · Jul 9, 2024 · PreprintCancer Biology

A systems-scale, integrated view of the ubiquitylation site occupancy and dynamics

G. Prus, S. Satpathy, B. Weinert, T. Narita, C. Choudhary

This paper quantifies ubiquitylation site occupancy and turnover rates, revealing their relationship to phosphorylation and identifying a surveillance mechanism protecting E1/E2 enzymes.

bioRxiv · Jul 19, 2023 · PreprintBiochemistry

Survival Genie, a web platform for survival analysis across pediatric and adult cancers.

B. Dwivedi, H. Mumme, S. Satpathy, S. S. Bhasin, M. Bhasin

Survival Genie enables survival analysis of gene sets, pathways, and single-cell data across cancers to correlate molecular profiles with clinical outcomes.

bioRxiv · Sep 28, 2021Cancer Biology

Automating UbiFast for High-throughput and Multiplexed Ubiquitin Enrichment

K. D. Rivera, M. E. Olive, E. J. Bergstrom, A. J. Nelson, K. A. Lee, S. Satpathy, S. A. Carr, N. D. Udeshi

The paper automates the UbiFast method to enable high-throughput, multiplexed ubiquitylation profiling, identifying ~20,000 sites from 500 g input in ~2 hours with improved reproducibility and scalability.

bioRxiv · Apr 28, 2021Biochemistry

Highly multiplexed quantitative phosphosite assay for biology and preclinical studies

H. Keshishian, E. R. McDonald, R. Melanson, D. A. Porter, F. Mundth, K. Krug, L. Wallace, D. Forestier, B. Rabasha, S. E. Marlow, J. Jane-Valbuena, E. Todres, H. Specht, J. Golji, E. Kuhn, , S. A. Carr

The paper introduces SigPath, a mass spectrometry assay that quantifies 284 phosphosites across 200 phosphoproteins, revealing new insights into phospho-signaling in cancer models and human tumors.

bioRxiv · Dec 8, 2020Cancer Biology

Antioxidant enriched fraction from Pueraria tuberosa alleviates ovariectomized-induced osteoporosis in rats, and inhibits growth of breast and ovarian cancer cell lines in vitro

S. Satpathy, A. Patra, M. D. Hussain, M. Kazi, M. S. Aldughaim, B. Ahirwar, Arjun Patra, Muhammad Delwar Hussain, Mohsin Kazi, Mohammed S Aldughaim, Bharti Ahir, Swaha Satpathy

This study evaluates an antioxidant-rich fraction from Pueraria tuberosa, showing benefits in osteoporosis and anticancer effects in vitro.

bioRxiv · Sep 21, 2020Pharmacology & Toxicology

Isolation and molecular identification of pectinase producing Aspergillus species from different soil samples of Bhubaneswar regions

S. Satpathy, P. M. Behera, D. K. Tanty, S. Srivastava, H. Thatoi, S. L. Sahoo

The paper isolates and identifies pectinase-producing Aspergillus species from soil samples using molecular biology and computational techniques, finding Aspergillus parvisclerotigenus as a potent producer.

bioRxiv · Nov 9, 2019 · PreprintMicrobiology

Microscaled Proteogenomic Methods for Precision Oncology

S. Satpathy, E. J. Jaehnig, K. Krug, B.-J. Kim, A. B. Saltzman, D. Chan, K. R. Holloway, M. Anurag, C. Huang, P. Singh, A. Gao, N. Namai, Y. Dou, B. Wen, S. Vasaikar, , M. J. Ellis

This study develops microscaled proteogenomic methods for cancer analysis, showing treatment response and resistance mechanisms in ERBB2-positive breast cancers.

bioRxiv · Oct 9, 2019Cancer Biology

UbiFast, a rapid and deep-scale ubiquitylation profiling approach for biology and translational research

N. D. Udeshi, D. Mani, S. Satpathy, S. Fereshetian, J. Gasser, T. Svinkina, B. Ebert, P. Mertins, S. A. Carr

UbiFast enables rapid, high-throughput ubiquitylation profiling of up to 10,000 sites from small tissue samples, with applications in cancer research.

bioRxiv · Sep 27, 2019Biochemistry