Author

S. Silva

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Plant Biology· 2 Biophysics· 1 Cancer Biology· 1 Immunology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 4 Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Research Focus:host-pathogen & immune response· 2 Organism:mouse· 2 Organism:Arabidopsis· 1 Organism:C. elegans· 1 Research Focus:cell signaling & trafficking· 1

Frequent Co-Authors

A. Domingues-Jr· 1 shared A. Perez-Lopez· 1 shared A. Sacchetti· 1 shared B. Goncalves· 1 shared B. van der Steen· 1 shared C. Caldana· 1 shared C. Cunha· 1 shared C. van Schie· 1 shared

Activity by Year

2018-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 6 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperPlant Biology

A. Domingues-Jr

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

The origin of intestinal cancer in the context of inflammation

M. P. Verhagen, R. Joosten, M. Schmitt, N. Valimaki, A. Sacchetti, K. Rajamaki, J. Choi, P. Procopio, S. Silva, B. van der Steen, T. P. P. van den Bosch, D. Seinstra, M. Doukas, L. H. Augenlicht, L. A. Aaltonen, R. Fodde

The paper shows that secretory cell lineages, not stem cells, can trigger tumor formation in the context of inflammation and Western-style diets, which are major colon cancer risk factors.

bioRxiv · Oct 2, 2023 · PreprintCancer Biology

Basal expression of immune receptor genes requires low levels of the phytohormone salicylic acid

T. van Butselaar, S. Silva, D. Lapin, I. Banales, S. Tonn, C. van Schie, G. Van den Ackerveken

This study shows that low levels of salicylic acid are required for basal expression of immune receptor genes in Arabidopsis thaliana, enabling early pathogen detection.

bioRxiv · Jul 14, 2023Plant Biology

Metabolic profiling of drought tolerance: revealing how citrus rootstocks modulate plant metabolism under varying water availability

S. Silva, M. Miranda, C. Cunha, A. Domingues-Jr, J. Aricetti, C. Caldana, E. Machado, R. V. Ribeiro

This study investigates how Rangpur lime rootstocks modulate citrus metabolism under drought, identifying metabolic changes linked to drought tolerance.

bioRxiv · Jul 9, 2022Plant Biology

CCL28 modulates neutrophil responses during infection with mucosal pathogens

A. Perez-Lopez, S. Silva, M. Lee, N. Dillon, S. Brandt, R. Gerner, K. Melchior, G. T. Walker, V. Sosa-Hernandez, R. Cervantes-Diaz, S. Romero-Ramirez, J. Maravillas-Montero, S.-P. Nuccio, V. Nizet, M. Raffatellu

This study shows CCL28 enhances neutrophil responses in mucosal infections, improving pathogen clearance in some cases but worsening disease in others.

bioRxiv · Mar 19, 2021Immunology

Effect of progesterone on Candida albicans biofilm formation under acidic conditions: a transcriptomic analysis

B. Goncalves, R. Bernardo, C. Wang, N. Pedro, G. Butler, J. Azeredo, M. Henriques, N. Mira, S. Silva

This study investigates how progesterone and acidic conditions affect C. albicans biofilm formation and gene expression, revealing progesterone's inhibitory effects on biofilm biomass and fluconazole resistance.

bioRxiv · Mar 27, 2019Microbiology

The SIRAH force field 2.0: Altius, Fortius, Citius

M. R. Machado, E. E. Barrera Guisasola, F. Klein, M. Sonora, S. Silva, S. Pantano

The paper introduces an updated coarse-grained SIRAH force field for proteins, demonstrating its ability to accurately model structural and dynamic behaviors of calcium-binding proteins like Calmodulin.

bioRxiv · Oct 5, 2018Biophysics