Author

Y.-F. Li

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 1 Ecology· 1 Immunology· 1 Microbiology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 5 Research Focus:cell type annotation· 2 Assay:metagenomics· 2 Assay:proteomics· 2 Assay:bulk RNA-seq· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:development & morphogenesis· 1 Research Focus:ecology & biodiversity· 1

Frequent Co-Authors

M. B. Sullivan· 2 shared S. Roux· 2 shared V. I. Rich· 2 shared A. Sorisky· 1 shared A. Varsani· 1 shared B. J. Woodcroft· 1 shared B.-L. Song· 1 shared C. Sun· 1 shared

Activity by Year

2020-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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2 shared papersMicrobiology

M. B. Sullivan

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Population ecology and potential biogeochemical impacts of ssDNA and dsDNA soil viruses along a permafrost thaw gradient

G. Trubl, S. Roux, M. A. Borton, A. Varsani, Y.-F. Li, C. Sun, H. B. Jang, B. J. Woodcroft, G. W. Tyson, K. C. Wrighton, S. R. Saleska, E. A. Eloe-Fadrosh, M. B. Sullivan, V. I. Rich

The paper analyzes ssDNA and dsDNA soil viruses along a permafrost thaw gradient to assess their ecological roles and biogeochemical impacts on carbon processing.

bioRxiv · Jun 13, 2023 · PreprintMicrobiology

Statin-mediated reduction in mitochondrial cholesterol primes an anti-inflammatory response in macrophages by upregulating JMJD3

Z. Saiioum, K. Dauner, Y.-f. Li, N. Verma, V. Almendro-Vedia, D. VALDIVIESO GONZALEZ, D. J. Zhang, K. Nakka, J. McDonald, A. Sorisky, B.-L. Song, I. Lopez Montero, J. Luo, J. Dilworth, X. Zha

This study shows statins reduce macrophage cholesterol, upregulate JMJD3, and shift macrophage activation toward anti-inflammatory responses in both M1 and M2 states.

bioRxiv · Jan 9, 2023Biochemistry

Control of Leaf Width by the APC/CTAD1-WL1-NAL1 Pathway in Rice

J. You, W. Xiao, Y. Zhou, L. Ye, G. Yu, P. Yu, X. Zhang, Z. He, Y. Xiang, X. Sang, Y.-F. Li, F. Zhao, Y. Ling, G. He, T. Zhang

This study identifies the APC/CTAD1-WL1-NAL1 pathway as a regulator of leaf width in rice and shows that mutations in WL1 lead to leaf width variation.

bioRxiv · Jan 10, 2022 · PreprintPlant Biology

Autophagy-associated Production of Antimicrobial Peptides hBD1 and LL37 Exhibits Anti-Bacillus Calmette-Guerin Effects in Lung Epithelial Cells.

R.-n. Wang, H.-l. Liu, Y.-x. Chen, Q. Wen, X.-y. Zhou, J.-l. Wang, J.-h. Yang, Y.-f. Li, Z.-y. Han, L. Ma

The paper shows that autophagy in lung epithelial cells enhances the production of antimicrobial peptides hBD1 and LL37, which kill intracellular Mycobacterium tuberculosis.

bioRxiv · Feb 21, 2020 · PreprintImmunology

Glacier ice archives fifteen-thousand-year-old viruses

Z.-P. Zhong, N. E. Solonenko, Y.-F. Li, M. C. Gazitua, S. Roux, M. E. Davis, J. L. Van Etten, E. Mosley-Thompson, V. I. Rich, M. B. Sullivan, L. G. Thompson

This paper develops clean sampling methods to study microbes and viruses in glacier ice, revealing 33 viral populations including potential novel genera and their associations with bacteria.

bioRxiv · Jan 3, 2020Ecology