scCDC: a computational method for gene-specific contamination detection and correction in single-cell and single-nucleus RNA-seq data
Weijian Wang, Yihui Cen, Zezhen Lu, Yueqing Xu, Tianyi Sun, Ying Xiao, Wanlu Liu, Jingyi Jessica Li, Chaochen Wang
scCDC detects and corrects contamination in scRNA-seq and snRNA-seq data by identifying contamination-causing genes, achieving better accuracy than existing methods.
Genome biology · May 23, 2024Peer-reviewedBioinformatics