Systematic optimization and benchmarking of synchro-PASEF for high-throughput phosphoproteome profiling
Dain R. Brademan, Angelina A. Mullarkey, Mia L. Greeson…·Ruth Hüttenhain
This paper optimizes and benchmarks synchro-PASEF for phosphoproteomics, showing improved identification and quantification with retention time summation, and comparable performance to dia-PASEF in modeling phosphosignaling.