Alexey A. Gavrilov

This study shows H-NS silences bacterial antiviral immunity by compacting chromatin, and its deletion enhances phage defense in E. coli.

This paper characterizes OLD, an abortive immunity protein, revealing its structure and activation mechanism in response to phage replication and DNA defects in RecBCD-compromised cells.

This study identifies long non-coding RNAs (lncRNAs) as guides for the SWI/SNF complex to cell-specific enhancers, revealing a mechanism for chromatin accessibility and gene expression control.

This study introduces MChIP-C, a method to measure chromatin interactions at single-nucleosome resolution, and supports the enhancer-promoter looping model using data from K562 cells and CRISPRi screens.

The paper investigates chromatin looping in Dictyostelium discoideum, finding that convergent gene pairs act as directional barriers for chromatin extrusion during development.

The paper investigates how 1,6-hexanediol modulates liquid-liquid phase separation and its impact on 3D chromatin organization in living cells.

The paper introduces Red-C, a method to study RNA-DNA interactions, identifies ncRNAs associated with repressed chromatin, and traces mRNA production kinetics in K562 cells.