Author
Nastassja Koen
South African Medical Research CouncilORCID 0000-0002-1119-8142Unclaimed ORCID profile · follow to get notified of new preprints
Biology Disciplines
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2018-2026 · peak 3/yrCo-Author Collaboration Network
10 top collaborators · 40 mutual co-author linksMutual co-authors in cluster
16 papers
Recent·Most cited
- Genetic & Genomic MedicinemedRxivPreprintDOI 10.64898/2026.09.30.26364416
- GeneticsbioRxivPreprint✦ In-depth digest
Analysis of Rare Coding Variation Identifies New Genetic Contributors to Schizophrenia
Julia Sealock, Connor Dowd, Calwing Liao…·Akena Dickens
Ultra-rare damaging coding variants in 87,959 schizophrenia cases and 150,587 controls implicate 40 genes (16 exome-wide, 24 at 5% FDR), half overlapping autism, developmental delay or bipolar genes.
1 citation - NeurosciencebioRxivPreprint✦ In-depth digest
Epigenetic and brain age across development: Performance and associations in the MIND consortium
Marlene Staginnus, Vilte Baltramonaityte, Isabel K. Schuurmans…·Esther Walton
Across 15 cohorts (birth to 24 years), 20 epigenetic clocks and eight brain age models predicted chronological age modestly, stabilizing by middle childhood; their age residuals were weakly associated.
1 citation - Genetic & Genomic MedicineEuropean NeuropsychopharmacologyPeer-reviewed
Cell type-specific methylome-wide association studies of childhood ADHD symptoms
Mandy Meijer, Marieke Klein, Doretta Caramaschi…·Edwin J. C. G. van den Oord
This study identifies cell type-specific DNA methylation associations with childhood ADHD symptoms using deconvolution and sequencing-based methylation data from peripheral and cord blood.
3 citations - GenomicsbioRxivPreprint
A blended genome and exome sequencing method captures genetic variation in an unbiased, high-quality, and cost-effective manner
Toni A. Boltz, Benjamin B. Chu, Calwing Liao…·Alicia R. Martin
The paper introduces BGE, a sequencing method that combines low-pass whole genome and deep whole exome data, showing high accuracy and cost-effectiveness for genetic variant discovery.
12 citations - Genetic & Genomic MedicinemedRxivPreprint
Epigenetic age deviation and mental health in childhood and adolescence: A systematic review and meta-analysis
L.B. Moyakhe, Shareefa Dalvie, Tsaone Chalumbila…·Nastassja Koen
This review examines the link between epigenetic age deviation and mental health in children, finding mixed results with some studies showing associations but no consistent meta-analysis result.
1 citation - Genetic & Genomic MedicinemedRxivPreprint
Polygenic risk associations with developmental and mental health outcomes in childhood and adolescence: A systematic review
L.B. Moyakhe, Shareefa Dalvie, Mary Sophia Mufford…·Nastassja Koen
This review identifies polygenic risk scores (PRS) for neurodevelopmental and mental health disorders associating with adverse outcomes in childhood and adolescence, suggesting shared genetic factors across these conditions.
1 citation - Genetic & Genomic MedicineEpigeneticsPeer-reviewed
Pruning and thresholding approach for methylation risk scores in multi-ancestry populations
Junyu Chen, Evan Gatev, Todd M. Everson…·Anke Hüls
The paper introduces a pruning and thresholding method for methylation risk scores to improve prediction across multi-ancestry populations, showing better performance than simple thresholding.
16 citations - GenomicsThe American Journal of Human GeneticsPeer-reviewed
Genetic structure correlates with ethnolinguistic diversity in eastern and southern Africa
Elizabeth G. Atkinson, Shareefa Dalvie, Yakov Pichkar…·NeuroGAP-Psychosis Study Team
This study examines genetic structure in African populations using ethnolinguistic data, finding that language classifications better capture genetic variation than geography alone.
26 citations - GeneticsbioRxivPreprint
Multi-ancestry GWAS of major depression aids locus discovery, fine-mapping, gene prioritisation, and causal inference
Xiangrui Meng, Georgina Navoly, Olga Giannakopoulou…·Karoline B. Kuchenbaecker
This paper conducts a multi-ancestry GWAS of major depression, identifying 190 loci and 354 genes, with findings showing increased fine-mapping power and bidirectional BMI relationship in European ancestry samples.
4 citations - GeneticsbioRxivPreprint
Low generalizability of polygenic scores in African populations due to genetic and environmental diversity
Lerato Majara, Allan Kalungi, Nastassja Koen…·Alicia R. Martin
This study evaluates the generalizability of polygenic scores in African populations, finding that PRS accuracy varies significantly across African ancestries and is improved by using ancestrally diverse genetic studies.
26 citations - GeneticsNature CommunicationsPeer-reviewed
Variably methylated regions in the newborn epigenome: environmental, genetic and combined influences
Darina Czamara, Gökçen Eraslan, Christian Magnus Page…·Robert M. Maier
The paper examines how genetic and environmental factors influence DNA methylation at variably methylated regions in neonatal blood, finding that combined effects best explain methylation variability.
143 citationstop 2% - GenomicsTranslational PsychiatryPeer-reviewed
Concordance Of Genetic Variation That Increases Risk For Tourette Syndrome And That Influences Its Underlying Neurocircuitry
Mary Sophia Mufford, Josh W. Cheung, Neda Jahanshad…·Dan Joseph Stein
This study identifies genetic overlaps between Tourette Syndrome risk and subcortical brain volumes using GWAS and pleiotropy analysis.
31 citationstop 3% - GenomicsbioRxivPreprint
Maternal psychosocial risk factors and offspring gestational epigenetic age acceleration in a South African birth cohort study
Nastassja Koen, Meaghan J. Jones, Raymond T. Nhapi…·Dan Joseph Stein
1 citation - GeneticsbioRxivPreprint
Largest genome-wide association study for PTSD identifies genetic risk loci in European and African ancestries and implicates novel biological pathways
Caroline M. Nievergelt, Adam X. Maihofer, Torsten Klengel…·Douglas Maurer
This study conducts the largest GWAS for PTSD, identifying 6 genome-wide significant loci in European and African ancestries and highlighting novel biological pathways.
21 citations - Developmental BiologyBrain Behavior and ImmunityPeer-reviewed
Gene expression in cord blood links genetic risk for neurodevelopmental disorders with maternal psychological distress and adverse childhood outcomes
Michael S. Breen, Aliza P. Wingo, Nastassja Koen…·Dan Joseph Stein
The paper identifies gene expression signatures in cord blood linked to maternal psychological distress and adverse childhood outcomes, revealing molecular pathways associated with neurodevelopmental disorders.
35 citationstop 5%