Author

Elise Shen

Allen Institute for Brain ScienceORCID 0000-0002-3295-3928Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Neuroscience· 3

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Research Focus:cell type annotation· 3 Organism:mouse· 3 Assay:spatial transcriptomics· 3 Approach:experimental assay· 2 Approach:statistical model· 2

Frequent Co-Authors

Hongkui ZengiD· 3 shared Julie A. HarrisiD· 3 shared Karla E. HirokawaiD· 3 shared Lydia NgiD· 3 shared Quanxin WangiD· 3 shared Xiuli KuangiD· 3 shared Yaoyao LiiD· 3 shared Aaron Feiner· 2 shared

Activity by Year

2019-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersNeuroscience

Hongkui ZengORCID

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3 papers

Recent·Most cited

Cellular Anatomy of the Mouse Primary Motor Cortex

Rodrigo Muñoz-Castañeda, Brian Zingg, Katherine S. Matho, Xiaoyin Chen, Quanxin Wang, Nicholas N. Foster, Anan Li, Arun Narasimhan, Karla E. Hirokawa, Bing‐Xing Huo, Samik Bannerjee, Laura Korobkova, Chris Sin Park, Young-Gyun Park, Michael S. Bienkowski, , Hong‐Wei Dong

The paper provides a detailed cellular-resolution map of the mouse primary motor cortex, defining cell types and their connectivity.

Nature · Oct 6, 2021Peer-reviewedNeuroscience

Brain-wide single neuron reconstruction reveals morphological diversity in molecularly defined striatal, thalamic, cortical and claustral neuron types

Hanchuan Peng, Peng Xie, Lijuan Liu, Xiuli Kuang, Yimin Wang, Lei Qu, Hui Gong, Shengdian Jiang, Anan Li, Zongcai Ruan, Liya Ding, Chao Chen, Mengya Chen, Tanya L. Daigle, Zhangcan Ding, , Hongkui Zeng

Complete morphologies of 1,708 neurons, sparsely labelled and imaged whole-brain with fMOST, expose region-specific long-range projection rules and finer diversity than current transcriptomic subtypes capture.

bioRxiv · Sep 27, 2020 · PreprintNeuroscience

The organization of intracortical connections by layer and cell class in the mouse brain

Julie A. Harris, Ştefan Mihalaş, Karla E. Hirokawa, Jennifer D. Whitesell, Hannah Choi, Amy Bernard, Phillip Bohn, Shiella Caldejon, Linzy Casal, Andrew Cho, Aaron Feiner, David H. Feng, Nathalie Gaudreault, Charles R. Gerfen, Nile Graddis, , Hongkui Zeng

The paper expands the Allen Mouse Brain Connectivity Atlas by analyzing intracortical connections at the layer and cell class level, revealing modular organization and distinct projection patterns.

Nature · Oct 30, 2019Peer-reviewedNeuroscience