Author

Shengdian Jiang

Southeast UniversityORCID 0000-0002-2277-263XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:mouse· 5 Assay:spatial transcriptomics· 4 Research Focus:cell type annotation· 3 Research Focus:database / resource· 3 Approach:experimental assay· 2 Approach:statistical model· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1

Frequent Co-Authors

Hanchuan PengiD· 5 shared Hongkui ZengiD· 3 shared Lijuan LiuiD· 3 shared Michael HawrylycziD· 3 shared Zhixi YuniD· 3 shared Giorgio A. AscoliiD· 2 shared Hong‐Wei DongiD· 2 shared Lei QuiD· 2 shared

Activity by Year

2020-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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5 shared papersNeuroscience

Hanchuan PengORCID

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5 papers

Recent·Most cited

Beyond Static Brain Atlases: AI-Powered Open Databasing and Dynamic Mining of Brain-Wide Neuron Morphometry

Shengdian Jiang, Lijun Wang, Zhixi Yun, Hanbo Chen, Lijuan Liu, Jianhua Yao, Hanchuan Peng

NeuroXiv provides an AI-powered database of neuron morphologies from mouse brains, enabling dynamic analysis and comparison across a standardized atlas.

Nature Methods · Apr 29, 2025Peer-reviewedBioinformatics

Non-homogenous axonal bouton distribution in whole-brain single cell neuronal networks

Penghao Qian, Linus Manubens-Gil, Shengdian Jiang, Hanchuan Peng

The paper examines axonal bouton distribution in mouse neurons, showing non-homogeneous patterns and their impact on whole-brain network topology.

Cell Reports · Mar 1, 2024Peer-reviewedNeuroscience

The BRAIN Initiative Cell Census Data Ecosystem: A User's Guide

Michael Hawrylycz, Maryann Elizabeth Martone, Patrick R. Hof, Ed S. Lein, Aviv Regev, Giorgio A. Ascoli, Jan Gunnar Bjaalie, Hong‐Wei Dong, Satrajit Ghosh, Jesse A Gillis, Ronna P. Hertzano, David R. Haynor, Yongsoo Kim, Yufeng Liu, Jeremy A. Miller, , Brian Zingg

The paper provides a guide to the BRAIN Initiative Cell Census Network (BICCN) data ecosystem, its tools, and resources for analyzing brain cell types across species.

bioRxiv · Oct 26, 2022 · PreprintBioinformatics

MorphoHub: A Platform for Petabyte-Scale Multi-Morphometry Generation

Shengdian Jiang, Yimin Wang, Lijuan Liu, Sujun Zhao, Mengya Chen, Xuan Zhao, Peng Xie, Liya Ding, Zongcai Ruan, Hong‐Wei Dong, Giorgio A. Ascoli, Michael Hawrylycz, Hongkui Zeng, Hanchuan Peng

The paper introduces MorphoHub, a platform for generating petabyte-scale multi-morphometry data, enabling high-quality analysis of neuronal structures in whole brain datasets.

bioRxiv · Jan 9, 2021 · PreprintNeuroscience

Brain-wide single neuron reconstruction reveals morphological diversity in molecularly defined striatal, thalamic, cortical and claustral neuron types

Hanchuan Peng, Peng Xie, Lijuan Liu, Xiuli Kuang, Yimin Wang, Lei Qu, Hui Gong, Shengdian Jiang, Anan Li, Zongcai Ruan, Liya Ding, Chao Chen, Mengya Chen, Tanya L. Daigle, Zhangcan Ding, , Hongkui Zeng

Complete morphologies of 1,708 neurons, sparsely labelled and imaged whole-brain with fMOST, expose region-specific long-range projection rules and finer diversity than current transcriptomic subtypes capture.

bioRxiv · Sep 27, 2020 · PreprintNeuroscience