Author

Michael J. Rosen

Stanford MedicineORCID 0000-0002-5149-718XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Organism:human· 3 Research Focus:differential expression· 2 Approach:experimental assay· 2 Assay:organoid / primary culture· 2 Research Focus:benchmarking· 1 Research Focus:cell-cell communication· 1 Research Focus:drug response / drug discovery· 1

Frequent Co-Authors

Babajide A. OjoiD· 2 shared Javier A. López-RiveraiD· 2 shared Marielle Gibson· 2 shared Neetu SainiiD· 2 shared Peacha Sokzini· 2 shared Tran Tracy· 2 shared Akshaya RamachandraniD· 1 shared Ally H Koh· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 32 mutual co-author links

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Curved chords = mutual co-authorship

2 shared papersImmunology

Babajide A. OjoORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Single-cell immune repertoire atlas maps coordinated circulating adaptive immune states in inflammatory bowel disease

John Mark B. Gubatan, Jiayu Ye, Christin Lund‐Andersen, Jorge Canas, Yuxi Zhou, Theresa Louise Boye, Jacqueline N. Hoang, Raoul S. Sojwal, Touran Fardeen, Tran Tracy, Peacha Sokzini, Ally H Koh, Marielle Gibson, Yuting Huang, Kathryn Peterson, , Geir Kjetil Sandve

This study creates a single-cell immune repertoire atlas in IBD patients, revealing coordinated immune states and identifying potential therapeutic targets.

bioRxiv · Sep 23, 2026 · PreprintImmunology

FOXP3-engineered regulatory T cells restore intestinal barrier integrity in Crohn's disease enteroids via PDGF-AA

Neetu Saini, Babajide A. Ojo, Niharika Bozza, Akshaya Ramachandran, Pinki Gahlot, Javier A. López-Rivera, Tran Tracy, Peacha Sokzini, Hemmo H Meyer, James Dunn, Maria Grazia Roncarolo, Michael J. Rosen, Rosa Bacchetta

FOXP3-engineered regulatory T cells enhance intestinal barrier function in Crohn's disease enteroids via the PDGF-AA-PDGFR axis, independent of their immunosuppressive role.

bioRxiv · May 28, 2026 · PreprintImmunology

Patient-derived colon epithelial organoids reveal lipid-related metabolic dysfunction in pediatric ulcerative colitis

Babajide A. Ojo, Ying Zhu, Lyong Heo, Sejal R. Fox, Yanli Qiao, Amanda Waddell, Maria E. Moreno‐Fernandez, Marielle Gibson, Tracy Tran, Ashley L. Dunn, Essam A. Elknawy, Neetu Saini, Javier A. López-Rivera, Senad Divanovic, Yuqin Dai, , Michael J. Rosen

This study uses patient-derived colon organoids to identify lipid-related metabolic dysfunction in pediatric ulcerative colitis and shows that PPAR-α inhibition can alleviate metabolic and inflammatory features.

Nature Communications · Dec 10, 2025Peer-reviewedPhysiology