Daniel Montiel-Garcia

FoldaVirus, a knowledge-based icosahedral capsid builder using AlphaFold

FoldaVirus generates icosahedral virus capsid models using AlphaFold predictions and structural knowledge, validated by energy minimization and distance metrics.

Decoding epitope immunodominance in HIV Env using cryoEM and machine learning

This study uses cryoEM and machine learning to predict and redirect immunodominant epitopes in HIV Env, showing improved vaccine antigen design.

Catalyzing computational biology research at an academic institute through an interest network

The paper describes how a volunteer-led affinity group enhances computational biology skills and networking among researchers at an academic institute.

Anti-Immune Complex Antibodies are Elicited During Repeated Immunization with HIV Env Immunogens

The paper identifies anti-immune complex antibodies generated through repeated HIV Env immunizations and presents their structures using polyclonal epitope mapping.

MrHAMER yields highly accurate single molecule viral sequences enabling analysis of intra-host evolution

MrHAMER enables accurate long-range viral sequencing, allowing analysis of intra-host evolution and genetic interactions in HIV.