Author

Noah F. Shroyer

Baylor College of MedicineORCID 0000-0002-5934-2852Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Organism:mouse· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1

Frequent Co-Authors

Michael A. HelmrathiD· 2 shared Andrew E. Rosselot· 1 shared Andrew Groves· 1 shared Anthony William MaressoiD· 1 shared Anubama RajaniD· 1 shared Christian I. HongiD· 1 shared Clarissa Estrella· 1 shared Danilo E. F. L. FlôresiD· 1 shared

Activity by Year

2018-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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2 shared papersMolecular Biology

Michael A. HelmrathORCID

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3 papers

Recent·Most cited

Ontogeny and function of the circadian clock in intestinal organoids

Andrew E. Rosselot, Miri Park, Mari Kim, Toru Matsuura, Gang Wu, Danilo E. F. L. Flôres, Krithika R. Subramanian, Suengwon Lee, Nambirajan Sundaram, Taylor R. Broda, Heather A. McCauley, Jennifer Hawkins, Kashish Chetal, Nathan Salomonis, Noah F. Shroyer, , Christian I. Hong

This study investigates circadian rhythms in human intestinal organoids, showing circadian phase-dependent necrotic cell death responses to TcdB and identifying anti-phasic gene expression between mouse and human enteroids.

The EMBO Journal · Oct 27, 2021Peer-reviewedMolecular Biology

Drivers of Transcriptional Variance in Human Intestinal Epithelial Organoids

Zachary K. Criss, Nobel Bhasin, Sara C. Di Rienzi, Anubama Rajan, Kali Deans-Fielder, Ganesh Swaminathan, Nabiollah Kamyabi, Xi‐Lei Zeng, HarshaVardhan Doddapaneni, Vipin K. Menon, Deepavali Chakravarti, Clarissa Estrella, Xiaomin Yu, Ketki Patil, Joseph F. Petrosino, , Noah F. Shroyer

This study identifies major sources of transcriptomic variation in human intestinal organoids, showing that culture methods like substrate and format have large effects compared to experimental manipulations.

Physiological Genomics · Oct 6, 2021Peer-reviewedMolecular Biology

Gfi1-expressing Paneth cells revert to stem cells following intestinal injury

Min-Shan Chen, Yuan-Hung Lo, Joann Butkus, Winnie Zou, Yu-Jung Tseng, Hsin-I Jen, Shreena Patel, Andrew Groves, Mary Estes, Ergun Sahin, Mark Frey, Peter Dempsey, Noah Shroyer

This study shows that Gfi1-expressing secretory cells can revert to stem cells after intestinal injury, with PI3kinase/AKT and WNT signaling enhancing this process.

bioRxiv · Jul 16, 2018 · PreprintCell Biology