Author

Gabriela Oana Bodea

The University of QueenslandORCID 0000-0002-9670-5237Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2 Developmental Biology· 1 Genetics· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Organism:human· 2 Assay:long-read sequencing· 2 Organism:mouse· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1

Frequent Co-Authors

Adam D. EwingiD· 3 shared Francisco Jose Sanchez-LuqueiD· 3 shared Geoffrey J. FaulkneriD· 3 shared Patricia GerdesiD· 3 shared Jay RasmusseniD· 2 shared Prabha AjjikuttiraiD· 2 shared Sandra R. RichardsoniD· 2 shared Alberto Anastacio AmarillaiD· 1 shared

Activity by Year

2020-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 41 mutual co-author links

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3 shared papersGenomics

Adam D. EwingORCID

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Author profile →

4 papers

Recent·Most cited

Mouse L1s fade with age: a methylation-enforced mechanism for attenuation of L1 retrotransposition potential

Patricia Gerdes, Dorothy Leung-Kwan Chan, Mischa Lundberg, Francisco Jose Sanchez-Luque, Gabriela Oana Bodea, Adam D. Ewing, Geoffrey J. Faulkner, Sandra R. Richardson

The paper investigates how L1 retrotransposition potential declines with age through methylation changes and promoter shortening in mice.

Genome Research · Sep 1, 2023Peer-reviewedGenetics

LINE-1 retrotransposon activation intrinsic to interneuron development

Gabriela Oana Bodea, Juan Manuel Botto, Maria E. Ferreiro, Francisco Jose Sanchez-Luque, Jose de los Rios Barreda, Jay Rasmussen, Muhammed A. Rahman, Laura R. Fenlon, Natasha Jansz, Carolina Gubert, Patricia Gerdes, Liviu‐Gabriel Bodea, Prabha Ajjikuttira, Darwin J. Da Costa Guevara, Linda Cumner, , Geoffrey J. Faulkner

The paper shows that SOX6 activates LINE-1 retrotransposons in PV+ interneurons, leading to increased morphological complexity through a novel CAPS2 isoform.

bioRxiv · Mar 20, 2022 · PreprintGenomics

No evidence of human genome integration of SARS-CoV-2 found by long-read DNA sequencing

Nathan Smits, Jay Rasmussen, Gabriela Oana Bodea, Alberto Anastacio Amarilla, Patricia Gerdes, Francisco Jose Sanchez-Luque, Prabha Ajjikuttira, Naphak Modhiran, Benjamin Liang, Jamila Faivre, Ira W. Deveson, Alexander A. Khromykh, Daniel Watterson, Adam D. Ewing, Geoffrey J. Faulkner

The paper uses long-read sequencing to investigate SARS-CoV-2 integration into the human genome and finds no evidence of such integration in infected cells.

Cell Reports · Jul 28, 2021Peer-reviewedGenomics

The transcription factor BCL11A defines a distinctive subset of dopamine neurons in the developing and adult midbrain

Marianna Tolve, Ayşe Ulusoy, Khondker Ushna Sameen Islam, Gabriela Oana Bodea, Ece Öztürk, Bianca Broske, Astrid Mentani, Antonia Wagener, Karen M. J. van Loo, Stefan Britsch, Pengtao Liu, Walid T. Khaled, Stephan L. Baader, Donato A. Di Monte, Sandra Blaess

This study identifies BCL11A as a defining transcription factor for a distinct subset of midbrain dopamine neurons, showing their vulnerability to Parkinson's disease and developmental roles in motor function.

bioRxiv · Oct 6, 2020 · PreprintDevelopmental Biology