Minh-Son Phan

EpiCure is a tool for curating epithelial segmentation errors in 2D movies, improving accuracy and efficiency in single-cell dynamics analysis.

This study investigates how Hedgehog signaling coordinates oscillatory atonal gene expression in Drosophila eye development.

The paper develops a semi-automated workflow using FIB-SEM data and nnU-Net to analyze liver sinusoid fenestration in mice, confirming BMP9's role in LSEC differentiation.

The paper studies symmetry breaking during lateral inhibition in Drosophila, finding that fate divergence occurs at low Sc levels without a prolonged low Sc phase and is corrected by cellular rearrangements.

The paper investigates pattern formation in the Drosophila eye using experiments and modeling, revealing a new relay model for propagating oscillations and crystal-like order through pulsatile Notch signaling.

The paper links apical size and deltaA expression to neural stem cell activation and division modes in zebrafish, showing their independence from Notch signaling.

The paper introduces nAdder, a 3D scale metric for analyzing neuronal traces, providing a new way to describe and compare axonal and dendritic complexity.

Rewritten Fiji plugin TrackMate now uses StarDist, ilastik, Weka, MorphoLibJ or imported label images as detectors, stores 2D object contours, and tracks shape and intensity over time.