bioRxivCancer BiologyPreprint
Impaired oxidative phosphorylation drives primary tumor escape and metastasis
Emily Nicole ArneriD, Erin Q. JenningsiD, Daniel R. CrooksiD, Christopher J. Ricketts, Melissa M. WolfiD, Matthew A. CottamiD, Emilie L. FisheriD, Martin LangiD, Nunziata MaioiD, Yuki Shibata, Evan KrystofiakiD, Logan M. VlachiD, Zaid HatemiD, Alexander M. BlattiD, Darren R. HeintzmaniD, Allison E. SewelliD, Emma S. HathawayiD, KayLee K. SteineriD, Xiang YeiD, Samuel SchaeferiD, Zachary A. BacigalupaiD, William Marston LinehaniD, Kathryn Eby BeckermanniD, Frank M. MasoniD, Kamran IdreesiD, , Jeffrey C. RathmelliD
Abstract
Metastasis causes most cancer deaths and reflects transitions from primary tumor escape to seeding and growth at metastatic sites. Epithelial-to-mesenchymal transition (EMT) is important early in metastasis to enable cancer cells to detach from neighboring cells, become migratory, and escape the primary tumor. While different phases of metastasis expose cells to variable nutrient environments and demands, the metabolic requirements and plasticity of each step are uncertain. Here we show that EMT and primary tumor escape are stimulated by disrupted oxidative metabolism. Using Renal Cell Carcinoma (RCC) patient samples, we identified the mitochondrial electron transport inhibitor NDUFA4L2 as upregulated in cells undergoing EMT. Deletion of NDUFA4L2 enhanced oxidative metabolism and prevented EMT and metastasis while NDUFA4L2 overexpression enhanced these processes. Mechanistically, NDUFA4L2 suppressed oxidative phosphorylation and caused citric acid cycle intermediates to accumulate, which modified chromatin accessibility of EMT-related loci to drive primary tumor escape. The effect of impaired mitochondrial metabolism to drive EMT appeared general, as renal cell carcinoma patient tumors driven by fumarate hydratase mutations with disrupted oxidative phosphorylation were highly metastatic and also had robust EMT. These findings highlight the importance of dynamic shifts in metabolism for cell migration and metastasis, with mitochondrial impairment driving early phases of this process. Understanding mitochondrial dynamics may have important implications in both basic and translational efforts to prevent cancer deaths.
- organism: human
- assay: bulk RNA-seq
- research focus: cell type annotation
- research focus: differential expression
- research focus: gene regulatory network inference
- research focus: cell-cell communication
- approach: statistical model
- approach: experimental assay
- Citations
- 4
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