bioRxivMolecular Biology
Human mismatch repair system corrects errors produced during lagging strand replication more effectively
Maria Andrianova, Georgii A Bazykin, Sergey Nikolaev, Vladimir Seplyarskiy
Abstract
Mismatch repair (MMR) is one of the main systems maintaining fidelity of replication. Different effectiveness in correction of errors produced during replication of the leading and the lagging DNA strands was reported in yeast, but this effect is poorly studied in humans. Here, we use MMR-deficient (MSI) and MMR-proficient (MSS) cancer samples to investigate properties of the human MMR. MSI, but not MSS, cancers demonstrate unequal mutation rates between the leading and the lagging strands. The direction of strand asymmetry in MSI cancers matches that observed in cancers with mutated exonuclease domain of polymerase {delta}, indicating that polymerase {delta} contributes more mutations than its leading-strand counterpart, polymerase {varepsilon}. As polymerase {delta} primarily synthesizes DNA during the lagging strand replication, this implies that mutations produced in wild type cells during lagging strand replication are repaired by the MMR ~3 times more effectively, compared to those produced on the leading strand.
- organism: human
- assay: DNA methylation
- research focus: differential expression
- approach: statistical model
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Life without mismatch repair
Mathijs Arnoud Sanders, Harald S. Vöhringer, … Peter J. Campbell·bioRxiv·Apr 14, 2021
- Error-prone bypass of DNA lesions during lagging strand replication is a common source of germline and cancer mutations
V. Seplyarskiy, E. E. Akkuratov, … S. R. Sunyaev·bioRxiv·May 26, 2018
- Replication-coupled search positions MutH for strand incision in DNA mismatch repair
Amy N. Moores, Nehir Banaz, … Stephan Uphoff·bioRxiv·Jul 22, 2026
- Deficiency in DNA mismatch repair of methylation damage is a major mutational process in cancer
Fang Hu, Xiaoqiang Zhu, … Jason W.H. Wong·bioRxiv·Nov 18, 2020
- Massively parallel single molecule tracking of sequence-dependent DNA mismatch repair in vivo
T. Kayikcioglu, J. S. Zarb, … T. Ha·bioRxiv·Jan 8, 2023
- The replication stress response suppresses mutation rates in mismatch repair deficient budding yeast and human cancers
A. M. Shrikhande, S. G. Soerensen, … E. R. Hoffmann·bioRxiv·Apr 28, 2022