Genome biologyGenomicsPeer-reviewed journal article
Minimal genome-wide human CRISPR-Cas9 library
Emanuel GonçalvesiD, Mark ThomasiD, Fiona M. BehaniD, Gabriele PiccoiD, Clare PaciniiD, Felicity R. AlleniD, Alessandro VincetiiD, Mamta SharmaiD, David A. Jackson, Stacey Price, Charlotte Beaver, Oliver M. DoveyiD, David J. Parry-Smith, Francesco IorioiD, Leopold PartsiD, Kosuke YusaiD, Mathew J. GarnettiD
Abstract
CRISPR guide-RNA libraries have been iteratively optimised to provide increasingly efficient reagents, although their large size is a barrier for many applications. We designed an optimised minimal genome-wide human CRISPR-Cas9 library (MinLibCas9), by mining existing large-scale gene loss-of-function datasets, resulting in a greater than 42% reduction in size compared to other libraries while preserving assay sensitivity and specificity. MinLibCas9 increases the dynamic range of CRISPR-Cas9 loss-of-function screens and extends their application to complex models and assays.
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