bioRxivMolecular BiologyPreprint
Phosphorylation of Z granule components regulates germ granule organization and RNAi inheritance
Lizaveta PshanichnayaiD, Martin BrehmiD, Ivan MikičićiD, Svenja Hellmann, Mohd Aaquib, Petra BeliiD, Sebastian FalkiD, René F. KettingiD
Abstract
Small RNAs represent important carriers of epigenetic information in nematodes, and factors involved in their biogenesis reside within perinuclear germ granules. Among these condensates, Z granules are essential for the inheritance of RNA interference (RNAi). The mechanisms by which Z granules form and promote this process remain unclear. We show that Casein kinase I alpha (KIN-19) is present in Z granules and associated with DEPS-1 and HERD-1 phosphorylation. In the absence of DEPS-1 and HERD-1 phosphorylation, animals have enlarged Z granules and enhanced RNAi inheritance. We propose that DEPS-1 acts as a phosphorylation-regulated scaffold that bridges ZNFX-1 and HERD-1 proteins. Our study demonstrates that Casein kinase I alpha-mediated phosphorylation is an important factor in germ granule modulation and RNAi inheritance, and additionally provides a novel molecular scaffold for understanding germ granule complexity in C. elegans.
- organism: C. elegans
- assay: proteomics
- research focus: cell type annotation
- research focus: differential expression
- research focus: gene regulatory network inference
- approach: statistical model
- approach: experimental assay
- Citations
- 0
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Germ Granules Functions are Memorized by Transgenerationally Inherited Small RNAs
Itamar Lev, Itai Antoine Toker, … Oded Rechavi·Current BiologyPeer-reviewed·Aug 1, 2019
- Germ Granules Coordinate RNA-based Epigenetic Inheritance Pathways
Anne E. Dodson, Scott G. Kennedy·Developmental CellPeer-reviewed·Aug 8, 2019
- Transgenerational Epigenetic Inheritance Factors Localize to Spatially and Temporally Ordered Liquid Droplet Assemblages
Gang Wan, Brandon D. Fields, … Scott G. Kennedy·bioRxiv·Jan 21, 2018
- Germ granules act as repositories for RNA and protein molecules essential for zebrafish germline development
Julian WR Wegner, Moritz Ophaus, … Erez Raz·bioRxiv·Oct 7, 2026
- Caenorhabditis elegans germ granules are present in distinct configurations that differentially associate with RNAi-targeted RNAs
C. J. Uebel, S. Rajeev, C. M. Phillips·bioRxiv·May 25, 2023
- Patterning of phase-separated condensates by Dnd1 controls cell fate
K. J. Westerich, K. Tarbashevich, … E. Raz·bioRxiv·Oct 20, 2022