Alzheimer s & DementiaBioinformaticsPeer-reviewed journal article
Sex-specific declines in cholinergic-targeting tRNA fragments in the nucleus accumbens in Alzheimer's disease
Dana ShulmaniD, Serafima DubnoviD, Tamara ZorbaziD, Nimrod MadreriD, Iddo PaldoriD, David Alan BennettiD, Sudha S. SeshadriiD, Elliott Jay MufsoniD, David GreenbergiD, Yonatan LoewensteiniD, Hermona SoreqiD
Abstract
IntroductionFemales with Alzheimers disease (AD) suffer accelerated dementia and loss of cholinergic neurons compared to males, but the underlying mechanisms are unknown. Seeking causal contributors to both these phenomena, we pursued changes in tRNA fragments (tRFs) targeting cholinergic transcripts (CholinotRFs). MethodsWe analyzed small RNA-sequencing data from the nucleus accumbens (NAc) brain region which is enriched in cholinergic neurons, compared to hypothalamic or cortical tissues from AD brains; and explored small RNA expression in neuronal cell lines undergoing cholinergic differentiation. ResultsNAc CholinotRFs of mitochondrial genome origin showed reduced levels that correlated with elevations in their predicted cholinergic-associated mRNA targets. Single cell RNA seq from AD temporal cortices showed altered sex-specific levels of cholinergic transcripts in diverse cell types; inversely, human-originated neuroblastoma cells under cholinergic differentiation presented sex-specific CholinotRF elevations. DiscussionOur findings support CholinotRFs contributions to cholinergic regulation, predicting their involvement in AD sex-specific cholinergic loss and dementia.
- organism: human
- assay: bulk RNA-seq
- assay: scRNA-seq
- research focus: differential expression
- approach: statistical model
- Citations
- 39
- FWCI
- 6.93
- Field percentile
- top 2%
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