Discovery of therapeutic agents targeting PKLR for NAFLD using drug repositioning
Cheng ZhangiD, Mengnan ShiiD, Woonghee Kim, Muhammad ArifiD, Martina KlevstigiD, Xiangyü LiiD, Hong YangiD, Cemil BayramiD, İsmail BolatiD, Özlem Özdemir TozluiD, Ahmet HacımüftüoğluiD, Serkan YıldırımiD, Jihad SebhaouiiD, Shazia IqbaliD, Yongjun WeiiD, Xiaojing ShiiD, Jens NielseniD, Hasan TürkeziD, Mathias UhléniD, Jan BoréniD, Adil MardinoğluiD
Abstract
Background & AimsNon-alcoholic fatty liver disease (NAFLD) encompasses a wide spectrum of liver pathologies. However, not medical treatment has been approved for the treatment of the disease. In our previous study, we found PKLR could be a potential target for treatment of NALFD. Here, the aim is to investigate the effect of PKLR in in vivo model and perform drug repositioning to identify a drug candidate for treatment of NAFLD. MethodsBiopsies from liver, muscle, white adipose tissue and heart were obtained from control and PKLR knockout mice fed with chow and high sucrose diets. Lipidomics as well as transcriptmics analyses were conducted using these tissue samples. In addition, a computational drug repositioning analysis was performed and drug candidates were identified. The drug candidates were finally tested in both in vitro and in vivo models to evaluated their toxicity and efficacy. ResultsThe Pklr KO reversed the increased hepatic triglyceride level in mice fed with high sucrose diet and partly recovered the transcriptomic changes in liver as well as other three tissues. Both liver and white adipose tissues exhibited dysregulated circadian transcriptomic profiles, and these dysregulations were reversed by hepatic knockout of Pklr. In addition, 10 small molecule drugs were identified as potential inhibitor of PKLR by the drug repositioning pipeline, and two of them significantly inhibited both the PKLR expression and triglyceride level in in vitro model. Finally, the two selected small molecule drugs were evaluated in in vivo rat models and it was demonstrated that these drugs attenuated hepatic steatosis without side effect on other tissues. ConclusionIn conclusion, our study provided biological insights about the critical role of PKLR in NAFLD progression and proposed a treatment strategy for NAFLD patients, which has been validated in preclinical experiment.
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 32
- FWCI
- 4.51
- Field percentile
- top 4%
- Organism
- Assay
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Hepatic MIR20B promotes nonalcoholic fatty liver disease by suppressing PPARA
Yo Han Lee, Hyun‐Jun Jang, … Jang Hyun Choi·eLifePeer-reviewed·Dec 29, 2021
- REV-ERB Agonism Improves Liver Pathology in a Mouse Model of NASH
K. Griffett, G. Bedia-Diaz, … T. P. Burris·bioRxiv·Jun 29, 2020
- What influences treatment response in animal models of non-alcoholic fatty liver disease? A meta-analysis with meta-regression.
H. Hunter, D. de Gracia Hahn, … J. P. Mann·bioRxiv·Dec 31, 2019
- (Pro)Renin Receptor Antagonism Attenuates High-Fat-Die-Induced Hepatic Steatosis in Non-Alcoholic Fatty Liver Disease
A. J. B. Gayban, L. Souza, … Y. Feng Earley·bioRxiv·Sep 7, 2022
- A diet-independent zebrafish model for NAFLD recapitulates patient lipid profiles and offers a system for small molecule screening
M. K. Singh, R. Yadav, … C. Sachidanandan·Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of LipidsPeer-reviewed·Jan 1, 2023
- Lysine tRNA fragments and miR-194-5p co-regulate hepatic steatosis via beta-Klotho and Perilipin 2
Yonat Tzur, Katarzyna Winek, … Hermona Soreq·Molecular MetabolismPeer-reviewed·Dec 21, 2023