Life Science AllianceDevelopmental BiologyPeer-reviewed journal article
Canonical and non-canonical PRC1 differentially contribute to the regulation of neural stem cell fate
Janine HoffmanniD, Theresa M. SchützeiD, Annika KolodziejczykiD, Karolin Küster, Annekathrin Kränkel, Susanne ReinhardtiD, Răzvan Petru DerihaciiD, Cahit BirdiriD, Pauline WimbergeriD, Haruhiko KosekiiD, Mareike AlbertiD
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Abstract
Neocortex development is characterized by sequential phases of neural progenitor cell (NPC) expansion, neurogenesis and gliogenesis. Polycomb-mediated epigenetic mechanisms are known to play important roles in regulating the lineage potential of NPCs during development. The composition of Polycomb Repressive Complex 1 (PRC1) is highly diverse in mammals and was hypothesized to contribute to context-specific regulation of cell fate. Here, we have performed side-by-side comparison of the role of canonical PRC1.2/1.4 and non-canonical PRC1.3/1.5, all of which are expressed in the developing neocortex, in NSC proliferation and differentiation. We found that the deletion of Pcgf2/4 in NSCs led to a strong reduction in proliferation and to altered lineage fate, both during the neurogenic and gliogenic phase, whereas Pcgf3/5 played a minor role. Mechanistically, genes encoding stem cell and neurogenic factors were bound by PRC1 and differentially expressed upon Pcgf2/4 deletion. Thus, rather than different PRC1 sub-complexes contributing to different phases of neural development, we found that canonical PRC1 played a more significant role in NSC regulation during proliferative, neurogenic and gliogenic phases compared to non-canonical PRC1.
- organism: mouse
- assay: ATAC-seq
- research focus: differential expression
- research focus: gene regulatory network inference
- research focus: cell type annotation
- approach: statistical model
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