Animal Virus Infections Studies

Emerging variants of canine enteric coronavirus associated with seasonal outbreaks of severe canine gastroenteric disease

The paper identifies a new CECoV variant associated with seasonal outbreaks of severe canine gastroenteritis and shows its genetic relationship to a 2020 variant, but not to human respiratory-related CECoV-like viruses.

Comparative virome analysis of individual shedding routes of Miniopterus fuliginosus bats inhabiting the Wavul Galge Cave, Sri Lanka

This study compares the virome composition of different shedding routes in M. fuliginosus bats, identifying novel viruses and shedding patterns.

Metatranscriptomic comparison of viromes in endemic and introduced passerines in New Zealand

The paper identifies novel viruses in introduced passerine birds in New Zealand and highlights potential risks to endemic species.

First whole-genome sequence of Cervid atadenovirus A outside of the United States from an Adenoviral hemorrhagic disease epizootic of black-tailed deer in Canada

The paper reports the first whole-genome sequence of Cervid atadenovirus A from Canada, identifying unique SNPs and deletions compared to other isolates.

Detection of porcine enteric viruses (Kobuvirus, Mamastrovirus and Sapelovirus) in domestic pigs in Corsica, France

The paper detects three porcine enteric viruses (PKoV, PAstV-1, and PSV) in Corsican pig farms using RT-qPCR and NGS, showing high prevalence and age-related differences.

PCBP1 Deficient Pigs Hold the Potential to Inhibit CSFV Infection

This study generates PCBP1 knockout pigs, which show reduced CSFV infection and provide a model for studying antiviral mechanisms.

Microbial Metagenomic Approach Uncovers the First Rabbit Haemorrhagic Disease Virus genome in Sub-Saharan Africa

The paper reports the first genomic characterization of RHDV2 in sub-Saharan Africa using metagenomic sequencing and identifies genetic diversity in GI.2 strains.

The United States Swine Pathogen Database: integrating veterinary diagnostic laboratory sequence data to monitor emerging pathogens of swine

The paper develops a centralized database for swine pathogen sequences to monitor emerging pathogens and support genomic surveillance.

Extensive Genetic Diversity and Host Range of Rodent-borne Coronaviruses

The paper identifies and characterizes genetic diversity and host range of rodent-borne coronaviruses in China, revealing new subtypes and genomic complexity.

Swine viral detection by adapted Next-Generation Sequencing (NGS) for RNA and DNA species reveals first detection of porcine circovirus type 3 (PCV3) in Chile

The paper uses adapted NGS to detect viruses in Chilean swine farms, identifying PCV3 for the first time in Chile.

Pervasive differential splicing in Marek’s Disease Virus can discriminate CVI-988 vaccine strain from RB-1B virulent strain in chicken embryonic fibroblasts

Inactivating porcine coronavirus before nuclei acid isolation with the temperature higher than 56 °C damages its genome integrity seriously

The paper shows that inactivating porcine coronavirus at temperatures above 56°C damages its genome integrity, but optimized preservation solutions can protect viral nucleic acids.

Identification of a Nidovirales Orf1a N7-guanine cap methyltransferase signature-sequence as a genetic marker of large RNA genome Tobaniviridae

The paper identifies a Rossman fold N7-guanine cap methyltransferase in the Orf1a of Tobaniviridae, suggesting a genetic marker for this viral family.

Comparative analysis of gene expression in virulent and attenuated strains of infectious bronchitis virus at sub-codon resolution

This study compares gene expression in virulent and attenuated IBV strains using RNASeq and RiboSeq, revealing differences in transcription, translation, and host response.

ALV-J and REV synergistically activate a new oncogene of KIAA1199 via NF-κB and EGFR signaling regulated by miR-147

This study identifies KIAA1199 as a new oncogene activated by ALV-J and REV synergism through NF-κB and EGFR pathways, with miR-147 suppression maintaining pathway crosstalk.