Author

Abhinandan Devaprasad

University Medical Center Utrecht

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 3 Genomics· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 4 Organism:human· 3 Approach:statistical model· 3 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Organism:mouse· 2 Research Focus:cell type annotation· 1 Assay:DNA methylation· 1

Frequent Co-Authors

Aridaman PanditiD· 3 shared Timothy R. D. J. RadstakeiD· 2 shared Alexander LeithneriD· 1 shared Ana P. LopesiD· 1 shared Ananda Kishore MukherjeeiD· 1 shared Andrea Rubio-PonceiD· 1 shared Andrés HidalgoiD· 1 shared Áron PánczéliD· 1 shared

Activity by Year

2019-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 14 mutual co-author links

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3 shared papersBioinformatics

Aridaman PanditORCID

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Author profile →

5 papers

Recent·Most cited

A resource for extracellular vesicles from activated CD4 T cells that relay pro-inflammatory signals

Ashwin Jainarayanan, Ranjeet Singh Mahla, Jesusa Capera, Mirudula Elanchezhian, Dhanu Gupta, Nithishwer Mouroug Anand, Tom R Thomas, Daniel Beckers, Alexander Leithner, Sooraj R. Achar, Salvatore Valvo, Mariana Conceição, Elke Kurz, Abhinandan Devaprasad, Sakina Amin, , Michael Loran Dustin

This study characterizes extracellular vesicles from activated CD4 T cells and shows their pro-inflammatory effects on antigen-presenting cells, providing a resource for EV-based therapeutic development.

bioRxiv · Oct 15, 2024 · PreprintImmunology

Zfp263 is a transcriptional checkpoint of neutrophil development

Abhinandan Devaprasad, Zhichao Ai, Ananda Kishore Mukherjee, Áron Pánczél, Tariq E. Khoyratty, Iván Ballesteros, Andrea Rubio-Ponce, Erinke van Grinsven, Lihui Wang, Julia Salafranca, Hayley L. Eames, Andrés Hidalgo, Attila Mócsai, Irina A. Udalova

This study identifies Zfp263 as a key transcriptional regulator in neutrophil development, showing it represses ERK1/2 signaling and controls differentiation and effector function acquisition.

bioRxiv · Aug 22, 2024 · PreprintGenomics

Enrichment of SARS-CoV-2 entry factors and interacting intracellular genes in peripheral immune cells

Abhinandan Devaprasad, Aridaman Pandit

The paper identifies enrichment of SARS-CoV-2 entry factors and interacting genes in peripheral immune cells of healthy and COVID-19 patients.

Viruses · Sep 2, 2021Peer-reviewedBioinformatics

CXCL4 links inflammation and fibrosis through transcriptional and epigenetic reprogramming of monocyte-derived cells

Sandra C. Silva‐Cardoso, Weiyang Tao, Chiara Angiolilli, Ana P. Lopes, Cornelis P. J. Bekker, Abhinandan Devaprasad, Barbara Giovannone, Jacob M. van Laar, Marta Cossu, Wioleta Marut, Erik Hack, Rob J. de Boer, Marianne L. Boes, Timothy R. D. J. Radstake, Aridaman Pandit

This study shows CXCL4 drives inflammation and fibrosis by altering monocyte-derived cell differentiation through transcriptional and epigenetic changes.

Frontiers in Immunology · Sep 17, 2020Peer-reviewedBioinformatics

Integration of immunome with disease-gene network reveals common cellular mechanisms between IMIDs and drug repurposing strategies

Abhinandan Devaprasad, Timothy R. D. J. Radstake, Aridaman Pandit

The paper identifies top disease-associated cells and genes in IMIDs and proposes drug repurposing targets using a DIME network approach.

bioRxiv · Dec 12, 2019 · PreprintBioinformatics