Author

C. Arias

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Microbiology· 4 Plant Biology· 2 Cell Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 4 Research Focus:host-pathogen & immune response· 4 Organism:human· 3 Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Research Focus:cell-cell communication· 2 Research Focus:clustering· 2 Research Focus:development & morphogenesis· 2

Frequent Co-Authors

H. Woosley· 2 shared A. Kearns· 1 shared A. L. Arce· 1 shared A. Matia· 1 shared A. Ramirez Negron· 1 shared B. Huang· 1 shared B. M. Gardner· 1 shared B. Pichon· 1 shared

Activity by Year

2018-2024 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 8 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersMicrobiology

H. Woosley

Mutual co-authors in cluster

Author profile →

7 papers

Recent·Most cited

Spatio-temporal analysis of Vaccinia virus infection and host response dynamics using single-cell transcriptomics and proteomics

A. Matia, F. McCarthy, H. Woosley, V. Turon-Lagot, S. W. Platzer, J. Liu, M. M. Lorenzo, M. Borja, K. Shetty, J. Winkler, J. E. Elias, R. Blasco, C. Arias, M. Y. Hein

This study uses single-cell transcriptomics and proteomics to analyze Vaccinia virus infection dynamics and host response heterogeneity in HeLa and fibroblast cells.

bioRxiv · Jan 13, 2024 · PreprintMicrobiology

Mantis: high-throughput 4D imaging and analysis of the molecular and physical architecture of cells

I. E. Ivanov, E. Hirata-Miyasaki, T. Chandler, R. C. Kovilakam, Z. Liu, S. Pradeep, C. Liu, M. Bhave, S. Khadka, C. Arias, M. D. Leonetti, B. Huang, S. B. Mehta

The paper introduces Mantis, a high-throughput 4D microscope, and shrimPy, software for analyzing 4D data, to study cellular dynamics and responses to perturbations like viral infection.

bioRxiv · Dec 19, 2023Cell Biology

Nucleolin-RNA interaction modulates rotavirus replication

J. Hernandez-Guzman, C. Arias, S. Lopez, C. Sandoval-Jaime

This study shows nucleolin inhibits rotavirus replication by interacting with viral RNA through G-quadruplex structures, increasing viral production when this interaction is disrupted.

bioRxiv · Oct 2, 2023Microbiology

BiP/GRP78 is a pro-viral factor for diverse dsDNA viruses that promotes the survival and proliferation of cells upon KSHV infection

G. Najarro, K. Brackett, H. Woosley, C. Faeldonea, O. K. Moreno, A. Ramirez Negron, C. Love, R. Ward, C. Langelier, B. M. Gardner, C. Arias

This study identifies BiP/GRP78 as a pro-viral factor that promotes cell survival and proliferation during KSHV infection and inhibits other dsDNA viruses.

bioRxiv · Sep 29, 2023Microbiology

Successful field performance in dry-warm environments of soybean expressing the sunflower transcription factor HaHB4

K. F. Ribichich, M. Chiozza, S. Avalos-Britez, J. V. Cabello, A. L. Arce, G. Watson, C. Arias, M. Portapila, F. Trucco, M. E. Otegui, R. L. Chan

This paper evaluates transgenic soybean expressing HaHB4 in greenhouse and field trials, finding improved seed yield in warm-dry environments due to increased seed number, xylem area, and water use efficiency.

bioRxiv · Dec 21, 2019Plant Biology

Genomic and epidemiological evidence of a dominant Panton-Valentine leucocidin-positive Methicillin Resistant Staphylococcus aureus lineage in Sri Lanka with spread to the United Kingdom and Australia

S. M. McTavish, S. J. Snow, E. C. Cook, B. Pichon, S. Coleman, G. Coombs, S. Pang, C. Arias, L. Diaz, E. Boldock, S. Davies, M. Udukala, A. Kearns, S. Siribaddana, T. de Silva

The paper conducts genomic analysis of MRSA in Sri Lanka, identifying a dominant PVL-positive ST5-MRSA-IVc lineage that spreads internationally.

bioRxiv · Jan 17, 2019Microbiology

NADP-dependent malic enzyme 1 participates in the abscisic acid response in Arabidopsis thaliana

C. Arias, T. Pavlovic, G. Torcolese, M. Badia, M. Gismondi, V. Maurino, C. Andreo, M. Drincovich, M. Gerrard Wheeler, M. Saigo

This study shows NADP-ME1 is involved in ABA response and seed development in Arabidopsis, with reduced activity affecting seed viability and stress responses.

bioRxiv · Jun 16, 2018Plant Biology