Author

M. Borja

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2 Cancer Biology· 1 Pharmacology & Toxicology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 4 Research Focus:differential expression· 4 Research Focus:cell-cell communication· 3 Assay:scRNA-seq· 3 Approach:deep learning· 2 Approach:experimental assay· 2 Organism:human· 2 Organism:mouse· 2

Frequent Co-Authors

A. O. Pisco· 2 shared J. Liu· 2 shared J. Winkler· 2 shared M. Y. Hein· 2 shared N. Neff· 2 shared A. Abbasi· 1 shared A. Detweiler· 1 shared A. Goga· 1 shared

Activity by Year

2019-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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2 shared papersMicrobiology

A. O. Pisco

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

How Mycobacterium tuberculosis builds a home: Single-cell analysis reveals M. tuberculosis ESX-1-mediated accumulation of anti-inflammatory macrophages in infected mouse lungs.

W. Zheng, M. Borja, L. Dorman, J. Liu, A. Zhou, A. Seng, R. Arjyal, S. Sunshine, A. Nalyvayko, A. O. Pisco, O. Rosenberg, N. Neff, B. S. Zha

This study uses single-cell RNA sequencing to show that M. tuberculosis ESX-1 promotes the recruitment and differentiation of anti-inflammatory macrophages in infected mouse lungs.

bioRxiv · Apr 20, 2024Microbiology

Spatio-temporal analysis of Vaccinia virus infection and host response dynamics using single-cell transcriptomics and proteomics

A. Matia, F. McCarthy, H. Woosley, V. Turon-Lagot, S. W. Platzer, J. Liu, M. M. Lorenzo, M. Borja, K. Shetty, J. Winkler, J. E. Elias, R. Blasco, C. Arias, M. Y. Hein

This study uses single-cell transcriptomics and proteomics to analyze Vaccinia virus infection dynamics and host response heterogeneity in HeLa and fibroblast cells.

bioRxiv · Jan 13, 2024 · PreprintMicrobiology

Dissecting the contributions of tumor heterogeneity on metastasis at single-cell resolution

J. Winkler, W. Tan, C. M. M. Diadhiou, C. S. McGinnis, A. Abbasi, S. Hasnain, S. Durney, E. Atamaniuc, D. Superville, L. Awni, J. V. Lee, J. H. Hinrichs, M. Y. Hein, M. Borja, A. Detweiler, , Z. Werb

This study analyzes single-cell transcriptomes of primary tumors and metastases from breast cancer models, identifying transcriptional differences and gene signatures linked to metastatic potential and patient outcomes.

bioRxiv · Aug 4, 2022 · PreprintCancer Biology

Reactive Dicarbonyl Scavenging Effectively Reduces MPO-Mediated Oxidation of HDL and Preserves HDL Atheroprotective Functions

J. Huang, P. G. Yancey, H. Tao, M. Borja, S. E. Loren, V. Kon, S. S. Davies, M. F. Linton

This study shows that reactive dicarbonyl scavengers reduce MPO-mediated HDL oxidation, preserve HDL function, and improve cholesterol efflux in FH-HDL and mice.

bioRxiv · Jan 23, 2019Pharmacology & Toxicology