Author

D. Ito

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 2 Ecology· 2 Biochemistry· 1 Cell Biology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 6 Research Focus:cell type annotation· 3 Research Focus:cell signaling & trafficking· 2 Research Focus:chromatin & epigenetic regulation· 2 Research Focus:development & morphogenesis· 2 Research Focus:ecology & biodiversity· 2 Research Focus:host-pathogen & immune response· 2 Organism:human· 2

Frequent Co-Authors

Y.-H. Lee· 3 shared F. Nakamura· 2 shared H. Izumi· 2 shared J. N. Negishi· 2 shared K. Kawajiri· 2 shared K. Miura· 2 shared N. Ishiyama· 2 shared Y. Lin· 2 shared

Activity by Year

2018-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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3 shared papersBiophysics

Y.-H. Lee

Mutual co-authors in cluster

Author profile →

7 papers

Recent·Most cited

Multiple stressors and recruitment failure of long-lived endangered freshwater mussels with a complex life cycle

K. Miura, N. Ishiyama, J. N. Negishi, D. Ito, K. Kawajiri, H. Izumi, T. Inoue, M. Nakaoka, F. Nakamura

This study investigates how multiple stressors affect recruitment efficiency in endangered freshwater mussels, identifying parasitic and post-parasitic juvenile stages as critical bottlenecks.

Aquatic Conservation: Marine and Freshwater Ecosystems · Nov 1, 2023Peer-reviewedEcology

Recruitment status and host-fish-limitation threats to endangered freshwater pearl mussel (Margaritifera laevis) in eastern Hokkaido, northern Japan

K. Miura, N. Ishiyama, J. N. Negishi, K. Kawajiri, H. Izumi, D. Ito, F. Nakamura

The paper assesses recruitment status and host-fish limitation threats to endangered freshwater pearl mussels in eastern Hokkaido, finding low juvenile proportions and a positive link between juvenile presence and host-fish density.

bioRxiv · May 19, 2023Ecology

Exploring ensemble structures of Alzheimer's amyloid β (1-42) monomer using linear regression for the MD simulation and NMR chemical shift

W. Yang, B. S. Kim, Y. Lin, D. Ito, J. H. Kim, Y.-H. Lee, W. Yu

This paper uses linear regression with NMR and MD simulation data to determine ensemble structures of Alzheimer's Aβ monomers, revealing β-sheet and partially-helical conformations and their implications for amyloidogenesis.

bioRxiv · Aug 23, 2021 · PreprintBiophysics

Dual effects of presynaptic membrane mimetics on α-synuclein amyloid aggregation

Y. Lin, D. Ito, J. M. Yoo, M. H. Lim, W. K. Yu, Y. Kawata, Y.-H. Lee

This study investigates how different membrane types affect α-synuclein aggregation, finding that presynaptic mimetic membranes have a dual effect on amyloid formation.

bioRxiv · Jul 13, 2021Biophysics

A unique adhesive motif of protein disulfide isomerase P5 supports its function via dimerization

M. Okumura, S. Kanemura, M. Matsusaki, M. Kinoshita, T. Saio, D. Ito, C. Hirayama, H. Kumeta, M. Watabe, Y. Amagai, Y.-H. Lee, S. Akiyama, K. Inaba

This study identifies a unique adhesive motif in P5 that enables dimerization, which is essential for its structural stability and functional roles in ER quality control.

bioRxiv · Nov 17, 2020Biochemistry

Plastidial (p)ppGpp synthesis by the Ca2+-dependent RelA-SpoT homolog regulates the adaptation of chloroplast gene expression to darkness in Arabidopsis

S. Ono, S. Suzuki, D. Ito, S. Tagawa, T. Shiina, S. MASUDA

This study shows that CRSH-dependent (p)ppGpp synthesis in Arabidopsis regulates plastid gene expression adaptation to darkness by transiently increasing ppGpp levels, which is counteracted by RSH1, RSH2, and RSH3.

bioRxiv · Sep 12, 2019Plant Biology

An ancestral role of pericentrin in centriole formation through SAS-6 recruitment

D. Ito, S. Zitouni, S. C. Jana, P. Duarte, J. Surkont, Z. Carvalho-Santos, J. B. Pereira-Leal, M. Godinho Ferreira, M. Bettencourt-Dias

The study identifies an ancestral interaction between pericentrin and SAS-6 that regulates centriole biogenesis and elongation, conserved across species despite centriole loss in yeasts.

bioRxiv · May 3, 2018Cell Biology