Author

E. Gomez-de-Mariscal

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 2 Cancer Biology· 2 Microbiology· 2

Signature Assays, Organisms & Methods

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Assay:imaging· 5 Research Focus:cell type annotation· 3 Approach:deep learning· 3 Approach:experimental assay· 3 Research Focus:cancer & tumor microenvironment· 2 Research Focus:cell-cell communication· 2 Organism:mouse· 2 Assay:proteomics· 2

Frequent Co-Authors

A. Munoz-Barrutia· 3 shared R. Henriques· 3 shared C. Spahn· 2 shared D. Wirtz· 2 shared M. Heilemann· 2 shared P. R. Nair· 2 shared S. Holden· 2 shared A. Locke· 1 shared

Activity by Year

2021-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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3 shared papersCancer Biology

A. Munoz-Barrutia

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

Transertion and cell geometry organize the Escherichia coli nucleoid during rapid growth

C. Spahn, S. Middlemiss, E. Gomez-de-Mariscal, R. Henriques, H. B. Bode, S. Holden, M. Heilemann

This study shows that transertion and cell geometry influence the spatial organization of the E. coli nucleoid during growth and antibiotic treatment.

bioRxiv · Oct 16, 2023 · PreprintMicrobiology

This microtubule does not exist: Super-resolution microscopy image generation by a diffusion model

A. Saguy, T. Nahimov, M. Lehrman, E. Gomez-de-Mariscal, I. Hidalgo-Cenalmor, O. Alalouf, R. Henriques, Y. Shechtman

This paper trains a diffusion model to generate realistic super-resolution microscopy images and shows its effectiveness in improving deconvolution performance with limited real data.

bioRxiv · Jul 6, 2023Bioengineering

Small extracellular vesicles promote stiffness-mediated metastasis

A. Sneider, Y. Liu, B. Starich, W. Du, C. Marar, N. Faqih, G. E. Ciotti, J. H. Kim, S. Krishnan, S. Ibrahim, M. Igboko, A. Locke, D. M. Lewis, H. Hong, M. Karl, , D. Wirtz

The paper shows that breast cancer cell-derived small extracellular vesicles (EVs) become more adhesive and metastatic when produced in stiff matrices, promoting cancer spread through enhanced chemotaxis and fibroblast reprogramming.

bioRxiv · Jul 1, 2023Cancer Biology

MLL1 regulates cytokine-driven cell migration and metastasis

P. R. Nair, L. Danilova, E. Gomez-de-Mariscal, D. Kim, R. Fan, A. Munoz-Barrutia, E. J. Fertig, D. Wirtz

This study shows MLL1 promotes cancer metastasis by regulating cytokine secretion and actin dynamics, and its inhibition reduces metastasis when combined with chemotherapy.

bioRxiv · Oct 18, 2022Cancer Biology

DeepBacs: Bacterial image analysis using open-source deep learning approaches

C. Spahn, R. F. Laine, P. M. Pereira, E. Gomez-de-Mariscal, L. von Chamier, M. Conduit, M. G. Pinho, S. Holden, G. Jacquemet, M. Heilemann, R. Henriques

DeepBacs uses open-source deep learning to analyze bacterial microscopy images, offering tools for segmentation, classification, and phenotyping with applications in antibiotic research.

bioRxiv · Nov 3, 2021Microbiology

DeepImageJ: A user-friendly environment to run deep learning models in ImageJ

E. Gomez-de-Mariscal, C. Garcia-Lopez-de-Haro, W. Ouyang, L. Donati, E. Lundberg, M. Unser, A. Munoz-Barrutia, D. Sage

DeepImageJ provides a user-friendly environment for using pre-trained deep learning models in ImageJ for biomedical image analysis tasks.

bioRxiv · May 6, 2021Bioengineering