Author

S. Kawamura

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Biochemistry· 2 Cell Biology· 2 Plant Biology· 2 Bioengineering· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 6 Research Focus:cell type annotation· 4 Organism:mouse· 3 Organism:bacteria (other)· 2 Research Focus:cell signaling & trafficking· 2 Assay:cryo-EM· 2 Research Focus:protein folding & dynamics· 2 Assay:bulk RNA-seq· 1

Frequent Co-Authors

A. Mizoguchi· 2 shared B. M. Humbel· 2 shared K. Tani· 2 shared K. V. P. Nagashima· 2 shared M. Hall· 2 shared M. T. Madigan· 2 shared R. Kanno· 2 shared R. Kikuchi· 2 shared

Activity by Year

2020-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBiochemistry

A. Mizoguchi

Mutual co-authors in cluster

Author profile →

7 papers

Recent·Most cited

Mitochondrial protein C15ORF48 is a stress-independent inducer of autophagy that regulates oxidative stress and autoimmunity

Y. Takakura, M. Machida, N. Terada, Y. Katsumi, S. Kawamura, K. Horie, M. Miyauchi, T. Ishikawa, N. Akiyama, T. Seki, T. Miyao, M. Hayama, R. Endo, H. Ishii, Y. Maruyama, , N. Yamaguchi

This study identifies C15ORF48 as a mitochondrial protein that induces stress-independent autophagy, reducing oxidative stress and autoimmunity in thymic epithelial cells.

bioRxiv · Oct 17, 2023Cell Biology

Harnessing deep learning to analyze cryptic morphological variability of Marchantia polymorpha

Y. Tomizawa, N. Minamino, E. Shimokawa, S. Kawamura, A. Komatsu, T. Hiwatashi, R. Nishihama, T. Ueda, T. Kohchi, Y. Kondo

This paper uses deep learning to classify sex in Marchantia polymorpha gemmalings, revealing that morphological differences are due to autosomal variation rather than sexual dimorphism.

bioRxiv · May 31, 2023 · PreprintPlant Biology

MarpolBase Expression: A Web-based, Comprehensive Platform for Visualization and Analysis of Transcriptomes in the Liverwort Marchantia polymorpha

S. Kawamura, F. Romani, M. Yagura, T. Mochizuki, M. Sakamoto, S. Yamaoka, R. Nishihama, Y. Nakamura, K. T. Yamato, J. L. Bowman, T. Kohchi, Y. Tanizawa

The paper introduces MBEX, a web-based platform for analyzing and visualizing transcriptomes in Marchantia polymorpha, demonstrating its utility through oil body biogenesis analysis.

bioRxiv · Jun 3, 2022Plant Biology

Asymmetric Structure of the Native Rhodobacter sphaeroides Dimeric LH1-RC Complex

K. Tani, R. Kanno, R. Kikuchi, S. Kawamura, K. V. P. Nagashima, M. Hall, A. Takahashi, L.-J. Yu, Y. Kimura, M. T. Madigan, A. Mizoguchi, B. M. Humbel, Z.- Y. Wang-Otomo

This paper presents cryo-EM structures of the dimeric LH1-RC complex from Rhodobacter sphaeroides, revealing asymmetric features and the role of protein-U in complex assembly.

bioRxiv · Dec 14, 2021Biochemistry

Open-source personal pipetting robots with live-cell incubation and microscopy compatibility

P. Dettinger, T. Kull, G. Arekatla, N. Ahmed, Y. Zhang, F. Schneiter, A. Wehling, D. Schirmacher, S. Kawamura, D. Loeffler, T. Schroeder

The paper introduces an open-source personal pipetting robot compatible with live-cell incubation and microscopy, designed for non-specialists to automate experiments.

bioRxiv · Jul 4, 2021Bioengineering

A Novel Membrane Protein in the Rhodobacter sphaeroides LH1-RC Photocomplex

K. Tani, K. V. P. Nagashima, R. Kanno, S. Kawamura, R. Kikuchi, M. Hall, L.- J. Yu, Y. Kimura, M. T. Madigan, A. Mizoguchi, B. M. Humbel, Z.- Y. Wang-Otomo

The paper presents a cryo-EM structure of the LH1-RC complex from Rhodobacter sphaeroides, identifying a new membrane protein and revealing structural insights into its dimerization and function.

bioRxiv · Jun 20, 2021Biochemistry

Changes in subcellular structures and states of Pumilio1 regulate the translation of target Mad2 and Cyclin B1 mRNAs

T. Kotani, N. Takei, Y. Takada, S. Kawamura, A. Saitoh, J. Bormann, W. S. Yuen, J. Carroll

The paper shows that changes in Pumilio1 structures and states regulate the translation of Mad2 and Cyclin B1 mRNAs in mouse oocytes through an aggregation-dissolution mechanism.

bioRxiv · Feb 25, 2020Cell Biology