Author

Julie Gamart

University of Bern

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Developmental Biology· 3

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Research Focus:gene regulatory network inference· 3 Organism:mouse· 3 Assay:ATAC-seq· 1 Assay:bulk RNA-seq· 1 Assay:ChIP-seq· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

Axel ViseliD· 3 shared Iros BarozziiD· 3 shared Brandon J. MannioniD· 2 shared Guillaume AndreyiD· 2 shared Javier López-Rı́osiD· 2 shared Jennifer A. AkiyamaiD· 2 shared Marco OsterwalderiD· 2 shared Matteo ZoiaiD· 2 shared

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2020-2025 · peak 1/yr

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10 top collaborators · 45 mutual co-author links

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3 shared papersDevelopmental Biology

Axel ViselORCID

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3 papers

Recent·Most cited

Functional architecture of cardiac TF regulatory landscapes in control of mammalian heart development

Virginia Roland, Johannes Tuechler, A. ESPOSITO, Mattia Conte, Matteo Zoia, Ekapaksi Wisnumurti, Virginie Tissières, Julie Gamart, Raquel Rouco, Ines Joao Marques, Akshay Akshay, Vincent Rapp, Brandon J. Mannion, Jennifer A. Akiyama, Prateek Arora, , Marco Osterwalder

The paper identifies essential cardiac enhancer modules and regulatory mechanisms governing heart development, revealing resilience in cis-regulatory architectures and the role of Hand2 upstream regulatory intervals.

bioRxiv · Dec 22, 2025 · PreprintDevelopmental Biology

SMAD4 target genes are part of a transcriptional network that integrates the response to BMP and SHH signaling during early limb bud patterning

Julie Gamart, Iros Barozzi, Frédéric Laurent, Robert Reinhardt, Laurène Ramos Martins, Thomas Oberholzer, Axel Visel, Rolf Zeller, Aimée Zúñiga

The paper identifies SMAD4 target genes and their role in integrating BMP and SHH signaling during early limb bud development, revealing opposing regulatory effects on anterior and posterior gene expression.

Development · Nov 25, 2021Peer-reviewedDevelopmental Biology

A gene desert required for regulatory control of pleiotropic Shox2 expression and embryonic survival

Samuel Abassah‐Oppong, Brandon J. Mannion, Matteo Zoia, Raquel Rouco, Virginie Tissières, Cailyn H. Spurrell, Virginia Roland, Fabrice Darbellay, Anja Ljubojevic, Julie Gamart, Tabitha A. Festa-Daroux, Carly S. Sullivan, Eddie Rodríguez-Carballo, Y. Fukuda, Riana D. Hunter, , Marco Osterwalder

This study identifies a gene desert critical for Shox2 regulation and embryonic survival through enhancer networks in mouse development.

bioRxiv · Nov 22, 2020 · PreprintDevelopmental Biology