Author

K. Shaw-Saliba

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3 Immunology· 1 Pathology· 1

Signature Assays, Organisms & Methods

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Research Focus:host-pathogen & immune response· 4 Research Focus:differential expression· 3 Approach:experimental assay· 3 Organism:human· 3 Approach:statistical model· 3 Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Assay:bulk RNA-seq· 1

Frequent Co-Authors

A. Pekosz· 5 shared R. Rothman· 4 shared H. Liu· 2 shared J. Evans· 2 shared J. Hardick· 2 shared K.-F. Chen· 2 shared M. Lewis· 2 shared P. Thielen· 2 shared

Activity by Year

2020-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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5 shared papersMicrobiology

A. Pekosz

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Integrated Drivers of Basal and Acute Immunity in Diverse Human Populations

A. Souquette, E. K. Allen, C. M. Oshansky, L. Tang, S.-s. Wong, T. Jeevan, L. Shi, S. Pounds, G. Elias, G. Kuan, A. Balmaseda, R. Zapata, K. Shaw-Saliba, P. Van Damme, V. Van Tendeloo, , P. G. Thomas

The paper examines factors influencing immunity across diverse populations, finding ancestry and age significantly affect immune responses and disease severity.

bioRxiv · Mar 25, 2023Immunology

Antigenic characterization and pandemic risk assessment of North American H1 influenza A viruses circulating in swine

D. Venkatesh, T. K. Anderson, J. B. Kimble, J. Chang, S. Lopes, C. K. Souza, A. Pekosz, K. Shaw-Saliba, R. E. Rothman, K.-F. Chen, N. Lewis, A. L. Vincent

This study assesses the antigenic and genetic diversity of swine H1 influenza A viruses in North America to evaluate pandemic risk.

bioRxiv · May 4, 2022Microbiology

Highly multiplexed oligonucleotide probe-ligation testing enables efficient extraction-free SARS-CoV-2 detection and viral genotyping

J. J. Credle, M. Robinson, J. Gunn, D. Monaco, B. Sie, A. L. Tchir, J. Hardick, X. Zheng, K. Shaw-Saliba, R. Rothman, S. Eshleman, A. Pekosz, K. Hansen, H. Mostafa, M. Steinegger, H. B. Larman

This paper introduces cRASL-seq, a method for sensitive and high-throughput SARS-CoV-2 detection and genotyping without nucleic acid extraction or reverse transcription.

bioRxiv · Jun 3, 2020Pathology

Identification of H3N2 NA and PB1-F2 genetic variants and their association with disease symptoms in the 2014-15 influenza season

D. Blumenkrantz, T. Mehoke, J. Hardick, K. Shaw-Saliba, H. Powell, N. Wohlgemuth, H. Liu, E. Macias, J. Evans, M. Lewis, R. Medina, L. M. Sauer, A. Dugas, A. DuVal, A. P. Lane, , A. Pekosz

The paper identifies H3N2 NA and PB1-F2 genetic variants and links their presence to increased cough and shortness of breath in patients during the 2014-15 influenza season.

bioRxiv · Feb 20, 2020Microbiology

Differential Disease Severity and Whole Genome Sequence Analysis for Human Influenza A/H1N1pdm Virus in 2015-2016 Influenza Season

H. Liu, Y.-N. Gong, K. Shaw-Saliba, T. Mehoke, J. Evans, Z.-Y. Liu, M. Lewis, L. Sauer, P. Thielen, R. Rothman, K.-F. Chen, A. Pekosz

The paper analyzes whole genome sequences of H1N1pdm viruses from 2015-2016 to compare disease severity between Baltimore and Taiwan, finding 6B.2 viruses associated with more severe symptoms in Taiwan.

bioRxiv · Feb 20, 2020 · PreprintMicrobiology