Author

M. R. Khan

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioengineering· 3 Cell Biology· 2 Microbiology· 2 Biochemistry· 1 Evolutionary Biology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 6 Assay:bulk RNA-seq· 3 Research Focus:cell type annotation· 3 Organism:mouse· 3 Approach:statistical model· 3 Research Focus:cell signaling & trafficking· 2 Research Focus:differential expression· 2 Research Focus:host-pathogen & immune response· 2

Frequent Co-Authors

C. Riviere-Cazaux· 3 shared C. Shaw· 3 shared T. Burns· 3 shared C. A. Traughber· 2 shared E. Opoku· 2 shared J. Smith· 2 shared K. Gulshan· 2 shared L. Strother· 2 shared

Activity by Year

2021-2023 · peak 5/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersBioengineering

C. Riviere-Cazaux

Mutual co-authors in cluster

Author profile →

10 papers

Recent·Most cited

DEVELOPMENT AND EVALUATION OF COATED RICOTTA CHEESE WITH WHEY PROTEIN AND CLOVE OIL

M. A. Aamir, E. Sarwar, A. Ahmed, F. Saeed, A. Ikram, M. Afzaal, F. Kiran, H. Ateeq, N. Akram, S. Hussain, M. R. Khan

This study evaluates the effect of whey protein and clove oil coatings on ricotta cheese shelf life, finding that 0.75% whey protein and 0.3% clove oil significantly extended shelf life to 21 days.

bioRxiv · Oct 25, 2023 · PreprintMicrobiology

Disulfiram reduces atherosclerosis and enhances efferocytosis, autophagy, and atheroprotective gut microbiota in hyperlipidemic mice.

C. A. Traughber, K. Timinski, A. Prince, N. Bhandari, K. Neupane, M. R. Khan, E. Opoku, E. Opoku, G. Brubaker, K. Nageshwar, E. G. Ertugral, P. Naggareddy, C. R. Kothapalli, J. Smith, K. Gulshan

bioRxiv · Oct 17, 2023Cell Biology

Patterns of presence-absence variation of NLRs across populations of Solanum chilense are clade-dependent and mainly shaped by past demographic history.

G. A. Silva Arias, E. Gagnon, S. Hembrom, A. Fastner, M. R. Khan, R. Stam, A. Tellier

The paper examines NLR presence-absence variation in Solanum chilense populations, finding it shaped by demographic history rather than selection or environmental factors.

bioRxiv · Oct 13, 2023Evolutionary Biology

A single dietary factor, daily consumption of a fermented beverage, can modulate the gut microbiome within the same ethnic community

S. Das, E. Ozkurt, T. K. Joishy, D. Deb, A. K. Mukherjee, F. Hildebrand, M. R. Khan

This study examines how daily consumption of a fermented beverage affects the gut microbiome and health of a specific ethnic community in India.

bioRxiv · Jan 18, 2023 · PreprintMicrobiology

Convection-enhanced diffusion and directed withdrawal of methylene blue in agarose hydrogel using finite element analyses

C. Shaw, K. Hossain, C. Riviere-Cazaux, T. Burns, M. R. Khan

This study uses finite element analysis to simulate convection-enhanced drug delivery in agarose hydrogels, showing how directed flow improves drug distribution and concentration control.

bioRxiv · Oct 27, 2022 · PreprintBioengineering

In Silico, Brain Mesh Platform for Computing Topographic Dependent Internal Facets

C. Shaw, C. Riviere-Cazaux, D. Obrochta, S. Otto, L. Ray, L. Strother, T. Burns, M. R. Khan

The paper develops a brain modeling platform using patient MRI data to simulate drug dispersal and fluid flow in healthy and diseased brains, focusing on glioblastoma.

bioRxiv · Oct 27, 2022 · PreprintBioengineering

MRI-to-Synthetic 3D Gel Brain: Proof-of-Concept Fabrication For Intra-Parenchymal Diffusion Studies

L. M. Ray, C. Shaw, S. Otto, C. Riviere-Cazaux, L. Strother, T. Burns, M. R. Khan

This paper demonstrates a method to create synthetic 3D gel brains from MRI data to study intra-parenchymal diffusion, showing improved representation of diffusion profiles compared to simple gel models.

bioRxiv · Oct 27, 2022 · PreprintBioengineering

Functional characterization of a PHF8 processed pseudogene in the mouse genome

J. St-Germain, M. R. Khan, V. Bavykina, R. Desmarais, M. Scott, G. Boissonneault, M. A. Brunet, B. Laurent

The paper identifies a functional PHF8 pseudogene in mice that produces a cytoplasmic protein with distinct molecular functions compared to the parental Phf8 protein.

bioRxiv · Oct 16, 2022Biochemistry

Miltefosine attenuates inflammation, reduces atherosclerosis, and alters gut microbiota in hyperlipidemic mice.

C. A. Traughber, A. J. Iacano, M. R. Khan, K. Nepane, E. Opoku, T. Nunn, N. Sangwan, S. L. Hazen, J. Smith, K. Gulshan

bioRxiv · Aug 22, 2022 · PreprintCell Biology

Impact of pre-anthesis drought stress on physiology, yield-related traits and drought responsive genes in green super rice

H. Ahmad, S. A. Zafar, M. K. Naeem, S. Shokat, S. Inam, A. S. Naveed, J. Xu, Z. Li, G. M. Ali, M. R. Khan

This study evaluates drought tolerance in green super rice by analyzing physiological traits and gene expression under drought stress, identifying drought-responsive genes and traits associated with higher tolerance.

bioRxiv · Nov 18, 2021Plant Biology