Nanopore sequencing of DNA concatemers reveals higher-order features of chromatin structure
Netha Ulahannan, Matthew Pendleton, Aditya S. Deshpande, Stefan Schwenk, Julie M. Behr, Xiaoguang Dai, Carly Tyer, Priyesh Rughani, Sarah Kudman, Emily M. Adney, Huasong Tian, David C. Wilkes, Juan Miguel Mosquera, David Stoddart, Dann Turner, , Marcin B. Imielinski
Pore-C reads multi-way chromatin contacts directly off unamplified Nanopore long reads, recovering Hi-C-scale features while also resolving rearranged cancer alleles and supporting de novo assembly.
bioRxiv · Nov 7, 2019 · PreprintGenomics