Author

O. Yilmaz

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 3 Cancer Biology· 1 Cell Biology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 6 Research Focus:host-pathogen & immune response· 4 Research Focus:cell signaling & trafficking· 2 Organism:human· 2 Research Focus:metabolism & bioenergetics· 2 Organism:mouse· 2 Assay:bulk RNA-seq· 1 Research Focus:cancer & tumor microenvironment· 1

Frequent Co-Authors

D. L. Trumper· 2 shared G. Eng· 2 shared K. Schneider· 2 shared L. G. Griffith· 2 shared A. Boulet· 1 shared A. Hossain· 1 shared A. Ozkul· 1 shared A. Reboul· 1 shared

Activity by Year

2019-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 13 mutual co-author links

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2 shared papersBioengineering

D. L. Trumper

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

Screening Peptide Drug Candidates to Neutralize Whole Viral Agents : A Case study with SARS-CoV-2 Virus

C. E. Ozcelik, C. Z. Araz, O. Yilmaz, S. Gulyuz, A. Ozkul, U. O. S. Seker

The paper uses M13 phage display to identify SARS-CoV-2 neutralizing peptides, finding three candidates with both binding and neutralizing capacity.

bioRxiv · Oct 22, 2023 · PreprintBioengineering

BNIP3L-mediated mitophagy triggered by Brucella in host cells is required for bacterial egress

J. Verbeke, Y. Fayt, L. Martin, O. Yilmaz, J. Sedzicki, A. Reboul, M. Jadot, P. Renard, C. Dehio, H.-F. Renard, J.-J. Letesson, X. De Bolle, T. Arnould

This study shows that Brucella abortus induces BNIP3L-mediated mitophagy to facilitate bacterial egress from host cells.

bioRxiv · Aug 31, 2022 · PreprintMicrobiology

Mitochondrial dysfunction triggers secretion of the immunosuppressive factor α-fetoprotein

K. A. Jett, Z. N. Baker, A. Hossain, A. Boulet, P. A. Cobine, S. Ghosh, P. Ng, O. Yilmaz, K. Barretto, J. DeCoteau, K. Mochoruk, G. Ioannou, C. Savard, S. Yuan, C. Lowden, , S. C. Leary

This study identifies a copper-linked signaling circuit triggered by mitochondrial dysfunction that leads to immune suppression via α-fetoprotein secretion.

bioRxiv · Jul 2, 2021 · PreprintCell Biology

EVALUATION OF THE EFFECT OF MESENCHYMAL STEM CELLS ON CHEMOTHERAPY RESPONSE FOR NEUROBLASTOMA TREATMENT IN AN EXPERIMENTAL ANIMAL MODEL

S. Aktas, Y. Olgun, H. Evin, P. Ercetin, T. C. Aktas, O. Yilmaz, G. Kirkim, N. Olgun

This study evaluates how mesenchymal stem cells (MSC) affect chemotherapy response and toxicity in a neuroblastoma model, finding that MSC reduces hearing loss from cisplatin without compromising its antitumor effect.

bioRxiv · Nov 9, 2020 · PreprintCancer Biology

Primary human colonic mucosal barrier crosstalk with super oxygen-sensitive Faecalibacterium prausnitzii in continuous culture

J. Zhang, Y. Huang, J.-Y. Yoon, J. Kemmitt, C. Wright, K. Schneider, P. Sphabmixay, V. Hernandez-Gordillo, S. J. Holcomb, B. M. Bhushan, G. Rohatgi, K. Benton, D. Carpenter, J. Kester, G. Eng, , L. G. Griffith

This study develops a co-culture platform to study interactions between human colonic mucosal barriers and Faecalibacterium prausnitzii, showing anti-inflammatory effects and butyrate's role in modulating TLR3/4.

bioRxiv · Jul 2, 2020Bioengineering

Gut-Liver physiomimetics reveal paradoxical modulation of IBD-related inflammation by short-chain fatty acids

M. Trapecar, C. Communal, J. Velazquez, C. A. Maass, Y.-J. Huang, K. Schneider, C. W. Wright, G. Eng, O. Yilmaz, D. L. Trumper, L. G. Griffith

The paper uses human physiomimetic systems to show short-chain fatty acids can both improve and worsen ulcerative colitis depending on CD4 T cell activation state.

bioRxiv · Aug 28, 2019Bioengineering