Author

R. A. Kingsley

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 6

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 3 Approach:experimental assay· 3 Assay:proteomics· 3 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Research Focus:host-pathogen & immune response· 2 Approach:statistical model· 2

Frequent Co-Authors

G. Thilliez· 4 shared H. Al-Khanaq· 3 shared E. M. Adriaenssens· 2 shared H. Pye· 2 shared L. Acton· 2 shared A. K. Cain· 1 shared A. Telatin· 1 shared A. V. Predeus· 1 shared

Activity by Year

2018-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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4 shared papersMicrobiology

G. Thilliez

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

Collateral sensitivity increases the efficacy of a rationally designed bacteriophage combination to control Salmonella enterica

L. Acton, H. Pye, G. Thilliez, R. Rafal, M. Matthews, K. Turner, M. Yasir, E. Holden, H. Al-Khanaq, M. Webber, E. M. Adriaenssens, R. A. Kingsley

This study identifies host susceptibility and resistance factors for Salmonella enterica infected by bacteriophages SPLA1a and SPLA5b, showing that their combination reduces phage resistance emergence.

bioRxiv · Sep 19, 2023 · PreprintMicrobiology

A hybrid and poly-polish workflow for the complete and accurate assembly of phage genomes: a case study of ten przondoviruses

C. K. A. Elek, T. L. Brown, T. Le Viet, R. Evans, D. J. Baker, A. Telatin, S. K. Tiwari, H. Al-Khanaq, G. Thilliez, R. A. Kingsley, L. J. Hall, M. A. Webber, E. M. Adriaenssens

This paper introduces HYPPA, a hybrid assembly workflow for phage genomes, demonstrating its ability to accurately assemble and correct phage genomes without laborious validation.

Microbial Genomics · Jul 18, 2023Peer-reviewedMicrobiology

High-throughput transposon mutagenesis in the family Enterobacteriaceae reveals core essential genes and rapid turnover of essentiality

F. Ashari Ghomi, G. Langridge, A. K. Cain, C. J. Boinett, M. Abd El Ghany, D. J. Pickard, R. A. Kingsley, N. Thomson, J. Parkhill, P. P. Gardner, L. Barquist

The paper uses transposon mutagenesis across Enterobacteriaceae species to identify core essential genes and shows rapid turnover of essentiality across related strains.

bioRxiv · Oct 20, 2022Microbiology

Strain and serovar variants of Salmonella enterica exhibit diverse tolerance to food chain-related stress

H. V. Pye, G. Thilliez, L. Acton, R. Kolenda, H. Al-Khanaq, S. Grove, R. A. Kingsley

The paper evaluates stress tolerance of diverse Salmonella enterica strains under food processing conditions to identify high-risk genotypes for food safety.

bioRxiv · Oct 11, 2022 · PreprintMicrobiology

Ecological niche adaptation of a bacterial pathogen associated with reduced zoonotic potential

M. Kirkwood, P. Vohra, M. Bawn, G. Thilliez, H. Pye, J. Tanner, C. Chintoan-Uta, P. Branchu, L. Petrovska, T. J. Dallman, N. Hall, M. Stevens, R. A. Kingsley

This paper identifies a bacterial pathogen variant, S. Typhimurium U288, that has adapted to pigs, resulting in reduced zoonotic potential compared to ST34.

bioRxiv · Sep 9, 2020 · PreprintMicrobiology

Adding function to the genome of African Salmonella ST313

R. Canals, D. L. Hammarlöf, C. Kröger, S. V. Owen, W. Y. Fong, L. Lacharme-Lora, X. Zhu, N. Wenner, S. E. Carden, J. Honeycutt, D. M. Monack, R. A. Kingsley, P. Brownridge, R. R. Chaudhuri, W. P. M. Rowe, , J. Hinton

The paper compares genomic and transcriptomic differences between Salmonella ST313 and ST19 isolates to identify phenotypic variations and a novel plasmid maintenance system.

bioRxiv · Oct 22, 2018Microbiology