Author

R. Ikeda

Shinshu University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cell Biology· 3 Biochemistry· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Organism:mouse· 2 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:drug response / drug discovery· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

A. Horii· 1 shared A. Okamoto· 1 shared Chihaya Kimura· 1 shared D. Noshiro· 1 shared E. Ryzhii· 1 shared H. Kagami· 1 shared H. Morishita· 1 shared K. Sakimura· 1 shared

Activity by Year

2022-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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1 shared paperCell Biology

A. Horii

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Osteogenic CpG oligodeoxynucleotide, iSN40, inhibits osteoclastogenesis in a TLR9-dependent manner

R. Ikeda, Chihaya Kimura, Yuma Nihashi, Koji Umezawa, Takeshi Shimosato, Tomohide Takaya

This study shows that iSN40, a CpG-ODN, inhibits osteoclast formation via TLR9-dependent mechanisms and may be a therapeutic for osteoporosis.

Life · Nov 30, 2024Peer-reviewedCell Biology

Development of the 12-base short dimeric myogenetic oligodeoxynucleotide that induces myogenic differentiation

K. Umezawa, R. Ikeda, T. Sakamoto, Y. Enomoto, Y. Nihashi, S. Shinji, T. Shimosato, H. Kagami, T. Takaya

This paper develops a 12-base myogenetic oligodeoxynucleotide that maintains the myogenic activity of a longer sequence while improving drug efficacy and synthesis cost.

bioRxiv · Mar 14, 2024Cell Biology

Phosphorylation of phase-separated p62 bodies by ULK1 activates a redox-independent stress response

M. Komatsu, R. Ikeda, D. Noshiro, H. Morishita, S. Takada, S. Kageyama, Y. Fujioka, T. Funakoshi, S. Komatsu-Hirota, R. Arai, E. Ryzhii, M. Abe, T. Koga, M. Nakao, K. Sakimura, , N. N. Noda

This study identifies ULK1 as the kinase responsible for phosphorylating p62, which activates NRF2 in a redox-independent manner through retention of KEAP1 in p62 bodies.

bioRxiv · Dec 21, 2022Cell Biology

Chemoenzymatic fluorescence labeling of intercellularly contacting cells using lipidated sortase A

S. Yamaguchi, R. Ikeda, Y. Umeda, T. Kosaka, S. Yamahira, A. Okamoto

This study develops a method to selectively label intercellularly contacting cells using chemoenzymatic approaches, validated by microscopy and flow cytometry.

bioRxiv · May 9, 2022 · PreprintBiochemistry