Author

Sima Benjamin

Weizmann Institute of Science

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2 Developmental Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Assay:DNA methylation· 2 Approach:experimental assay· 2 Organism:mouse· 2 Approach:statistical model· 2 Assay:ATAC-seq· 1 Assay:bulk RNA-seq· 1 Assay:ChIP-seq· 1

Frequent Co-Authors

Shlomit GiladiD· 3 shared William James GreenleafiD· 2 shared Aaron M. HorningiD· 1 shared Achia UrbachiD· 1 shared Alejandro Aguilera-CastrejoniD· 1 shared Anna Futorian· 1 shared Annika K K WeimeriD· 1 shared Ariel Jaimovich· 1 shared

Activity by Year

2017-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 22 mutual co-author links

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3 shared papersGenomics

Shlomit GiladORCID

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Author profile →

3 papers

Recent·Most cited

Ultra high-throughput whole-genome methylation sequencing reveals trajectories in precancerous polyps to early colorectal adenocarcinoma

Hayan Lee, Gat Krieger, Tyson A. Clark, Aziz Khan, Casey Ryan Hanson, Yizhou Zhu, Nasim Bararpour, Aaron M. Horning, Edward D. Esplin, Stephanie A. Nevins, Annika K K Weimer, Eti Meiri, Shlomit Gilad, Sima Benjamin, Danit Lebanony, , Michael P. Snyder

The paper uses ultra high-throughput methylation sequencing to study DNA methylation changes during colorectal cancer progression from normal tissue to adenocarcinoma.

bioRxiv · May 30, 2022 · PreprintGenomics

Single-cell RNA sequencing reveals mRNA splice isoform switching during kidney development

Yishay Wineberg, Tali Hana Bar-Lev, Anna Futorian, Nissim Ben-Haim, Leah Armon, Debby Ickowicz, Sarit Oriel, Efrat Dahan Bucris, Yishai Yehuda, Naomi Pode‐Shakked, Shlomit Gilad, Sima Benjamin, Peter Hohenstein, Benjamin Dekel, Achia Urbach, Tomer Kalisky C

The paper uses single-cell RNA sequencing to study mRNA splice isoform switching during mouse kidney development and identifies potential splicing regulators.

Journal of the American Society of Nephrology · Jul 10, 2020Peer-reviewedGenomics

High-Resolution Dissection of Conducive Reprogramming Trajectory to Ground State Pluripotency

Asaf Zviran, Nofar Mor, Yoach Rais, Hila Gingold, Shani Peles, Elad Chomsky, Sergey V. Viukov, Jason Daniel Buenrostro, Leehee Weinberger, Yair S. Manor, Vladislav Krupalnik, Mirie Zerbib, Hadas Hezroni, Diego Adhemar Jaitin, David Larastiaso, , Jacob H. Hanna

This paper maps high-resolution epigenetic and biosynthetic changes during reprogramming of fibroblasts to iPSCs, identifying two gene modules regulated by different mechanisms.

bioRxiv · Sep 7, 2017 · PreprintDevelopmental Biology