Author

W. A. Haynes

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 3 Cancer Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 4 Research Focus:differential expression· 2 Approach:experimental assay· 2 Assay:proteomics· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1

Frequent Co-Authors

J. C. Shon· 3 shared K. Kamath· 3 shared P. S. Daugherty· 2 shared A. Foye· 1 shared A. Iwasaki· 1 shared A. Khatri· 1 shared A. Ribas· 1 shared A. Vega-Crespo· 1 shared

Activity by Year

2019-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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3 shared papersImmunology

J. C. Shon

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Author profile →

4 papers

Recent·Most cited

High-affinity, neutralizing antibodies to SARS-CoV-2 can be made in the absence of T follicular helper cells

J. S. Chen, R. D. Chow, E. Song, T. Mao, B. Israelow, K. Kamath, J. Bozekowski, W. A. Haynes, R. B. Filler, B. L. Menasche, J. Wei, M. M. Alfajaro, W. Song, L. Peng, L. Carter, , S. C. Eisenbarth

The paper shows that high-affinity, neutralizing antibodies against SARS-CoV-2 can be produced without T follicular helper cells through alternative pathways.

bioRxiv · Jun 10, 2021Immunology

Autoantibody landscape of advanced prostate cancer

W. S. Chen, W. A. Haynes, R. Waitz, K. Kamath, A. Vega-Crespo, R. Shrestha, M. Zhang, A. Foye, I. Baselga Carretero, I. Garcilazo Perez, M. Zhang, S. G. Zhao, M. Sjostrom, D. A. Quigley, J. Chou, , F. Y. Feng

This study characterizes the autoantibody landscape in metastatic castration-resistant prostate cancer using serum epitope repertoire analysis and identifies novel tumor-specific epitopes.

bioRxiv · May 2, 2020 · PreprintCancer Biology

Protein-based Immunome Wide Association Studies (PIWAS) for the discovery of significant disease-associated antigens

W. A. Haynes, K. Kamath, P. S. Daugherty, J. C. Shon

This paper introduces PIWAS, a method using SERA and NGS to discover disease-associated antigens at a proteome scale, and validates it on SLE data.

bioRxiv · Mar 18, 2020Immunology

A Unified Molecular Signature of Systemic Lupus Erythematosus Revealed by Integrated, Multi-Cohort Transcriptomic Analysis

W. A. Haynes, D. J. Haddon, V. K. Diep, A. Khatri, E. Bongen, G. Yiu, I. Balboni, C. R. Bolen, R. Mao, P. J. Utz, P. Khatri

This study identifies a 93-gene signature associated with SLE through multi-cohort transcriptomic analysis, showing its clinical relevance and independence from known SLE-related signatures.

bioRxiv · Nov 7, 2019 · PreprintImmunology