Author

Wenwei Zhang

BGI Group (China)

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Biology Disciplines

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Developmental Biology· 2 Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Organism:plant (other)· 2 Assay:spatial transcriptomics· 2 Research Focus:database / resource· 1 Approach:machine learning (classical)· 1 Research Focus:protein structure prediction· 1

Frequent Co-Authors

Guangyi FaniD· 3 shared Jian Wang· 3 shared Tao YangiD· 3 shared An ZengiD· 2 shared Gang PeiiD· 2 shared Hanbo LiiD· 2 shared Hongwei Pan· 2 shared Huanming YangiD· 2 shared

Activity by Year

2019-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersDevelopmental Biology

Guangyi FanORCID

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Author profile →

4 papers

Recent·Most cited

The genetic repertoire of the deep sea: from sequence to structure and function

Yang Guo, Zongan Wang, Denghui Li, Lele Wang, Hongxia Lan, Fei Guo, Ziyu Zhao, Zhenjun Liu, Liang Meng, Xuechun Shen, Minxiao Wang, Weishu Zhao, Weijia Zhang, Chaodi Kong, Liuxin Shi, , Yuliang Dong

This study analyzes the genetic diversity of the deep sea, linking protein structures to genetic variants and identifying biotechnologically relevant features.

Cell Host & Microbe · Jun 10, 2026Peer-reviewedBioinformatics

Cell Type Architecture and Positional Gene Gradients in an Adult Animal at Subcellular Resolution

Maoqin Sun, Yuxiaofei Wang, Kai Han, Lidong Guo, Yuehua Chen, Yao Li, Yaru Lin, Xiawei Liu, Zhi Huang, Qun Liu, Wenjie Guo, Rui Zhang, Wandong Zhao, Langchao Liang, Xiaoyu Wei, , An Zeng

This study reconstructs 3D spatial transcriptomic models of planarians to map cell type distribution and positional gene regulation, identifying candidate genes involved in regeneration.

bioRxiv · Feb 20, 2026 · PreprintDevelopmental Biology

4D Single-Cell Spatial Transcriptomics Reveals Dynamic Morphogenetic Gradients and Regenerative Domains in Planarians

Kai Han, Yuxiaofei Wang, Yao Li, Lidong Guo, Yue Chen, Xiawei Liu, Yaru Lin, Zhi Huang, Qun Liu, Wenjie Guo, Rui Zhang, Wandong Zhao, Langchao Liang, Xiaoyu Wei, Li Zhou, , Mengyang Xu

This study constructs a 4D spatiotemporal transcriptomic map of planarian regeneration using Stereo-seq, identifying dynamic gradients and an injury-induced regenerative zone.

GigaScience · Jan 1, 2026Peer-reviewedDevelopmental Biology

Advanced Whole Genome Sequencing Using an Entirely PCR-free Massively Parallel Sequencing Workflow

Hanjie Shen, Pengjuan Liu, Zhanqing Li, Fang Chen, Hui Jiang, Shiming Shi, Yang Xi, Qiaoling Li, Xiaojue Wang, Jing Zhao, Xinming Liang, Yinlong Xie, Lin Wang, Wenlan Tian, Tam Berntsen, , Radoje Drmanac

This paper demonstrates that PCR-free whole genome sequencing using the DNBSEQ platform and machine learning variant calling significantly reduces InDel errors and improves variant calling performance.

bioRxiv · Dec 20, 2019 · PreprintGenomics