Copy number-aware deconvolution of tumor-normal DNA methylation profiles
Elizabeth Larose Cadieux, Nana Mensah, Carla Castignani, Miljana Tanić, Gareth A. Wilson, Michelle Dietzen, Pawan Dhami, Heli Vaikkinen, Annelien Verfaillie, Cristina Cotobal, Toby M. Baker, Thomas B.K. Watkins, Selvaraju Veeriah, Mariam Jamal‐Hanjani, Nnennaya Kanu, , Peter Van Loo
This paper introduces CAMDAC, a method to deconvolve tumor-normal DNA methylation profiles while accounting for copy number changes, revealing epigenetic instability and distinct patterns in lung cancer.
bioRxiv · Nov 3, 2020 · PreprintGenomics