Author

Ting Yan

Brigham and Women's HospitalORCID 0000-0002-9072-3821Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Organism:mouse· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Approach:experimental assay· 1

Frequent Co-Authors

Akina OsakiiD· 1 shared Cheng-Hao Chien· 1 shared Daniel Feng· 1 shared Davide SperiiD· 1 shared Evgenii KegelesiD· 1 shared Gary YelleniD· 1 shared Hisashi UmemoriiD· 1 shared Ian W. CampbelliD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperImmunology

Akina OsakiORCID

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2 papers

Recent·Most cited

The Onset of Breathing at Birth Switches Off Regenerative Capacity

Xuan Song, Xinyi Cai, Shane Hegarty, Davide Speri, Masahiro Yasuda, Ryan Donahue, Joanna Stanicka, Ting Yan, Susu Mao, Sarah Yang, Jiawen Chen, Junjie Zhu, James Kiraly, Cheng-Hao Chien, Evgenii Kegeles, , Zhigang He

The paper shows that breathing at birth triggers CO2 exhalation, which reduces mTOR activity and limits regenerative capacity in CNS neurons and other tissues, but this effect is reversible with CO2 inhalation or Snrk deletion.

bioRxiv · Oct 11, 2026 · PreprintNeuroscience

Transcriptomic timeseries links hepatic gene expression to an early and self-limited systemic response to enteric infection

Yuko Hasegawa, Akina Osaki, Masataka Suzuki, Ting Yan, Ian W. Campbell, Matthew K. Waldor

Matched liver and colon RNA-seq timeseries during Citrobacter rodentium infection in mice reveal an intimin-dependent hepatic cytokine burst at 3 days that tracks serum cytokine kinetics.

PLoS Pathogens · Aug 5, 2026Peer-reviewedImmunology✦ In-depth digest