Integrating genetic regulation and single-cell expression with GWAS prioritizes causal genes and cell types for glaucoma
Andrew R. Hamel, Wenjun Yan, John M. Rouhana…·Ayellet V. Segrè
Author
Harvard UniversityORCID 0000-0003-3568-4265Unclaimed ORCID profile · follow to get notified of new preprints
12 papers
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Andrew R. Hamel, Wenjun Yan, John M. Rouhana…·Ayellet V. Segrè
Joshua Hahn, Aboozar Monavarfeshani, Mu Qiao…·Karthik Shekhar
The paper integrates single-cell transcriptomic data from 17 vertebrate species to study the evolution of retinal cell types, finding conserved cell classes and subclasses with variation increasing from outer to inner retina.
Wai Lydia Tai, Kin‐Sang Cho, Emil Kriukov…·Dong Feng Chen
This study identifies DNMT3a as a key inhibitor of optic nerve regeneration in adult mice and shows that its suppression restores vision after injury.
Jin Li, Jun Wang, Ignacio L. Ibarra…·Rui Chen
The paper creates a comprehensive human retina cell atlas using single-cell multi-omics data, revealing over 110 cell types and their gene regulatory networks, and enables fine-mapping of GWAS and eQTL variants.
Feng Tian, Yuyan Cheng, Songlin Zhou…·Zhigang He
The paper identifies four ATF/CEBP transcription factors that drive injury-induced neurodegeneration of retinal ganglion cells and shows their role in glaucoma.
Anne Jacobi, Nicholas M. Tran, Wenjun Yan…·Joshua R. Sanes
The paper identifies transcriptional programs that enhance survival and axon regeneration of injured retinal ganglion cells using single-cell transcriptomics and computational analysis.
Masahito Yamagata, Wenjun Yan, Joshua R. Sanes
The paper generates a chick retina cell atlas using scRNA-seq, identifying 136 cell types and analyzing their molecular and spatial organization.
Wenjun Yan, Yi‐Rong Peng, Tavé A. van Zyl…·Joshua R. Sanes
The paper uses scRNA-seq to analyze 85,000 retinal cells from humans, identifies 58 cell types, and compares gene expression between fovea, peripheral retina, and macaques to study blinding diseases.
Wenjun Yan, Mallory A. Laboulaye, Nicholas M. Tran…·Joshua R. Sanes
This paper identifies 63 amacrine cell types in the mouse retina using scRNA-seq and provides molecular markers, neurotransmitter profiles, and transcription factors for each type.
Nicholas M. Tran, Karthik Shekhar, Irene E. Whitney…·Joshua R. Sanes
The paper identifies neuroprotective genes in retinal ganglion cells by analyzing their resilience to injury using single-cell RNA-seq and functional assays.
Xiaoxing Zhang, Wenjun Yan, Wenliang Wang…·Chengyu Li
This study shows that the anterior piriform cortex actively maintains odor information during working memory delay periods in mice, even when performing a distracting task.
Yi‐Rong Peng, Karthik Shekhar, Wenjun Yan…·Joshua R. Sanes
The paper classifies and compares cell types in primate fovea and peripheral retina using single-cell RNA-seq, finding conserved and divergent features across species and regions.