Directed Evolution of Multimodal Plastic Degrading Enzymes
Cecilia J. Petersson, E. James Petersson
This paper demonstrates the directed evolution of a multimodal plastic-degrading enzyme capable of breaking down both polyesters and polyurethane.
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University of PennsylvaniaORCID 0000-0003-3854-9210Unclaimed ORCID profile · follow to get notified of new preprints
11 papers
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Cecilia J. Petersson, E. James Petersson
This paper demonstrates the directed evolution of a multimodal plastic-degrading enzyme capable of breaking down both polyesters and polyurethane.
Evan S. K. Yanagawa, Kristen E. Fiore, Denver Y. Francis…·E. James Petersson
This paper develops a method to synthesize thioamide-containing proteins and shows they destabilize β-sheet structures in GB1 and α-synuclein fibrils.
Priyanda Giri, Yarra Venkatesh, Moriah H. Mathis…·E. James Petersson
This paper introduces a genetic code expansion method to integrate a fluorophore-quencher pair into proteins for monitoring dynamics, demonstrating applications in studying protein function and drug screening.
Bernard Abakah, Marie Shimogawa, Paola Miranda-Castrodad…·E. James Petersson
This study develops a method to produce highly modified α-synuclein with defined post-translational modifications and a fluorescent label to study their effects on structure and function.
Marshall G. Lougee, Grace S. H. Park, Hee Jong Kim…·E. James Petersson
This study uses μMap photo-proximity labeling to compare the interactomes of α-synuclein monomers and fibrils in mouse brain lysate to investigate synucleinopathy mechanisms.
Ibrahim G. Saleh, Marie Shimogawa, Jennifer Ramirez…·E. James Petersson
The paper provides methods for site-specific post-translational modification of alpha-synuclein and tau using genetic code expansion and enzymatic approaches, enabling studies of their structural dynamics and aggregation.
Xinning Li, Ryann M. Perez, Sam G. Giannakoulias, E. James Petersson
This paper introduces hint token learning to improve protein language models on mutational datasets through three case studies, showing better performance than traditional fine-tuning.
Juan C Sanchez, Ryann M. Perez, Dinahlee Saturnino Guarino…·Elizabeth Wright
The paper uses structural and chemical biology methods to show EX-6 binds selectively to α-synuclein fibrils in MSA tissue, with a 10-fold preference over PD tissue.
Yarra Venkatesh, Karthik B. Narayan, Tobias Baumgart, E. James Petersson
This paper designs new bimane-based fluorophores sensitive to polarity and viscosity for imaging α-synuclein in Parkinson's disease.
Marie Shimogawa, Minghao Li, Grace Shin Hye Park…·E. James Petersson
This study investigates how acetylation of specific lysine sites in α-synuclein affects aggregation and function, identifying K80 acetylation as a potential therapeutic target.
Kristen E. Fiore, Denver Y. Francis, Sobrielle M. Casimir…·E. James Petersson
This study investigates how thioamide substitutions in SpyTag affect ligation kinetics with SpyCatcher, showing both faster and slower complex formation depending on substitution position.