Sign in
MicrobiologyNature Communications
Peer-reviewed journal article

Transcription termination factor {rho} polymerizes under stress

Bing WangiD, Nelly SaidiD, Tarek HilaliD, Mark FinazzoiD, M. C. WahliD, Irina ArtsimovitchiD

Abstract

Bacterial RNA helicase {rho} is a genome sentinel that terminates synthesis of damaged and junk RNAs that are not translated by the ribosome. Co-transcriptional RNA surveillance by {rho} is essential for quality control of the transcriptome during optimal growth. However, it is unclear how bacteria protect their RNAs from overzealous {rho} during dormancy or stress, conditions common in natural habitats. Here we used cryogenic electron microscopy, biochemical, and genetic approaches to show that residue substitutions, ADP, or ppGpp promote hyper-oligomerization of Escherichia coli {rho}. Our results demonstrate that nucleotides bound at subunit interfaces control {rho} switching from active hexamers to inactive higher-order oligomers and extended filaments. Polymers formed upon exposure to antibiotics or ppGpp disassemble when stress is relieved, thereby directly linking termination activity to cellular physiology. Inactivation of {rho} through hyper-oligomerization is a regulatory strategy shared by RNA polymerases, ribosomes, and metabolic enzymes across all life.

PDFDOI

02 /Specification & Classification

Click any tag to browse matching papers

Reproducibility ledger

Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.

Sign in to file a reproducibility report.

Similarity Map
SelectedSame fieldCross-field
THISMurayama '22Molodtsov '23Shin '21Biedzinski '26Zhang '24Khitiri '26
67% semantic matchBiochemistry
Y. Murayama, H. Ehara, M. Goto+3 more·bioRxiv·Sep 2, 2022