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MicrobiologybioRxiv
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A dramatic protein fold switch powers a bactericidal nanomachine

Yao HeiD, Annie Si Cong LiiD, Xiaoying CaiiD, Shoichi TachiyamaiD, Rajeev KumariD, Devlina ChakravartyiD, Lauren L. PorteriD, Jun LiuiD, Alan R. DavidsoniD, Z. Hong ZhouiD

Abstract

Fold switching, where a protein region interconverts between entirely distinct three-dimensional structures, is emerging as vital for certain protein functions. Here, we report a remarkable example in the F7 pyocin, a phage tail-like bactericidal nanomachine. Cryogenic electron microscopy and tomography reveal that a 163-residue segment of the central tail fiber undergoes a dramatic transition--from a trimeric -helical coiled-coil to a triangular {beta}-prism--upon binding to the bacterial cell surface. This massive fold switch remodels the tail tip, ejects the internal tape measure protein, and drives membrane puncture. Site-directed mutations that selectively destabilize the {beta}-prism conformation completely abolish bactericidal activity without impairing particle assembly, implying that the energy released during this transition powers penetration. AlphaFold-based analyses further predict similar large-scale coiled-coil to {beta}-prism switches in diverse non-contractile phage tails. This discovery reveals a sophisticated, ATP-independent strategy for microbial warfare and opens exciting possibilities for engineering next-generation bacteriocins to combat multidrug-resistant pathogens.

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02 /Specification & Classification

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