Author

C. Ramos

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 4 Cell Biology· 2 Physiology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 7 Research Focus:cell type annotation· 4 Research Focus:cell signaling & trafficking· 3 Research Focus:host-pathogen & immune response· 3 Assay:metagenomics· 3 Organism:bacteria (other)· 2 Organism:Drosophila· 2 Research Focus:gene regulatory network inference· 2

Frequent Co-Authors

A. A. Soukas· 1 shared A. C. Neininger· 1 shared A. L. Crouch· 1 shared A. L. Means· 1 shared B. Chen· 1 shared B. Gillet· 1 shared C. J. Cho· 1 shared C. Lopes· 1 shared

Activity by Year

2018-2024 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 7 mutual co-author links

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1 shared paperPhysiology

A. A. Soukas

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Author profile →

8 papers

Recent·Most cited

The Dystrophin-Dystroglycan complex ensures cytokinesis efficiency in Drosophila epithelia

M. Goncalves, C. Lopes, H. Alegot, M. Osswald, F. Bosveld, C. Ramos, G. Richard, Y. Bellaiche, V. Mirouse, E. Morais-de-Sa

The paper identifies Dystrophin-Dystroglycan as essential for cytokinesis efficiency in Drosophila epithelia by regulating ring contraction and preventing membrane regression.

bioRxiv · Mar 14, 2024 · PreprintCell Biology

High-Throughput Phenotyping of Seed Quality Traits Using Imaging and Deep Learning in Dry Pea

M. Morales, H. Worral, L. Piche, S. A. Atanda, F. Dariva, C. Ramos, K. Hoang, C. Yan, P. Flores, N. Bandillo

This paper develops an automated seed quality assessment tool for dry peas using imaging and deep learning, achieving high accuracy and efficiency compared to traditional methods.

bioRxiv · Mar 5, 2024 · PreprintPlant Biology

C. elegans display antipathy behavior towards food after contemporaneous integration of nutritional needs and dietary lipid availability

N. Stuhr, C. Ramos, C. Turner, A. A. Soukas, S. P. Curran

This study identifies molecular mechanisms by which C. elegans avoid Methylobacterium after ingestion, integrating lipid metabolism and dietary needs to influence food preference.

bioRxiv · Feb 23, 2024 · PreprintPhysiology

A metagenomics approach to identification of eukaryotes in metazoan-associated microbiomes

A. L. Crouch, L. Monsey, C. Ramos, J. Yracheta, M. Z. Anderson

This paper develops a DNA extraction protocol to enrich for eukaryotic microbes in microbiome samples, demonstrating a 72-fold enrichment of eukaryotic DNA in synthetic stool.

bioRxiv · Nov 16, 2023 · PreprintMicrobiology

Intestinal GCN2 controls Drosophila systemic growth in response to Lactiplantibacillus plantarum symbiotic cues encoded by r/tRNA operons

T. Grenier, J. Consuegra, M. Galvao Ferrarini, H. Akherraz, L. Bai, Y. Dusabyinema, I. Rahioui, P. da Silva, B. Gillet, S. Hughes, C. Ramos, R. Matos, F. Leulier

The paper shows that Lactiplantibacillus plantarum uses r/tRNA operons to communicate with Drosophila, activating GCN2 in enterocytes to promote systemic growth.

bioRxiv · Oct 31, 2021Microbiology

Single-cell transcriptomics reveals a conserved metaplasia program in pancreatic injury

Z. Ma, N. K. Lytle, B. Chen, N. Jyotsana, S. Weiser Novak, C. J. Cho, L. Caplan, O. Ben-Levy, A. C. Neininger, D. T. Burnette, V. Q. Trinh, M. C. B. Tan, E. A. Patterson, R. Arrojo e Drigo, R. R. Giraddi, , K. E. DelGiorno

The paper uses single-cell RNA sequencing to identify a conserved metaplasia program in pancreatic injury, revealing mucin/ductal populations and neoplastic transformation potential.

bioRxiv · Apr 9, 2021Cell Biology

Recombination proteins differently control the acquisition of homeologous DNA during Bacillus subtilis natural chromosomal transformation

E. Serrano, C. RAMOS, J. C. Alonso, S. AYORA

This study identifies recombination proteins essential for interspecies DNA acquisition in Bacillus subtilis during chromosomal transformation beyond a certain sequence divergence threshold.

bioRxiv · May 13, 2020Microbiology

Integrity and stability of virulence plasmids from Pseudomonas syringae are modulated by mobile genetic elements and multiple toxin-antitoxin systems

L. Bardaji, M. Anorga, M. Echeverria, C. Ramos, J. Murillo

This study identifies stability determinants in virulence plasmids of Pseudomonas syringae, showing that toxin-antitoxin systems and mobile genetic elements influence plasmid integrity and deletion rates.

bioRxiv · Oct 25, 2018Microbiology