Author

C. S. Henry

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3 Biochemistry· 1 Bioengineering· 1 Ecology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 5 Research Focus:cell type annotation· 4 Assay:bulk RNA-seq· 2 Assay:metabolomics· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Organism:C. elegans· 1 Research Focus:clustering· 1

Frequent Co-Authors

A. C. Mosier· 1 shared A. C. Pelly· 1 shared A. D. Hanson· 1 shared A. E. Cherwin· 1 shared A. E. Goldman· 1 shared A. F. Yakunin· 1 shared A. Fiebig· 1 shared A. M. Deutschbauer· 1 shared

Activity by Year

2020-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 9 mutual co-author links

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Curved chords = mutual co-authorship

1 shared paperMicrobiology

A. C. Mosier

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

Application of chimeric antigens to paper-based diagnostics for detection of West Nile virus infections of Crocodylus porosus: a novel animal test case

R. A. Johnston, G. Habarugira, J. J. Harrison, S. R. Isberg, J. Moran, M. Morgan, S. S. Davis, L. F. Melville, C. B. Howard, C. S. Henry, J. Macdonald, H. A. Bielefeldt-Ohmann, R. A. Hall, J. Hobson-Peters

The paper develops a lateral flow assay using chimeric antigens to detect West Nile virus seroconversion in crocodiles, achieving 100% sensitivity and specificity.

bioRxiv · Mar 24, 2024 · PreprintBiochemistry

A functional microbiome catalog crowdsourced from North American rivers

M. A. Borton, B. B. McGivern, K. R. Willi, B. J. Woodcroft, A. C. Mosier, D. M. Singleton, T. Bambakidis, A. C. Pelly, F. Liu, J. N. Edirisinghe, J. P. Faria, I. Leleiwi, R. A. Daly, A. E. Goldman, M. J. Wilkins, , K. C. Wrighton

The paper creates GROWdb, a microbiome database from North American rivers, revealing microbial community structures and functional traits across watersheds.

bioRxiv · Jul 22, 2023 · PreprintMicrobiology

Microfluidic organotypic device to test intestinal mucosal barrier permeability ex vivo

A. E. Cherwin, H. N. Templeton, A. T. Ehrlich, B. H. Patlin, C. S. Henry, S. A. Tobet

The paper tests how collagen breakdown affects intestinal barrier integrity using a microfluidic device model with bacterial collagenase.

bioRxiv · Jul 18, 2023Bioengineering

Dynamic genetic adaptation of Bacteroides thetaiotaomicron murine gut colonization

M. Zhang, M. Kennedy, O. DeLeon, J. Bissell, F. Trigodet, K. Lolans, S. Temelkova, K. T. Carroll, A. Fiebig, A. M. Deutschbauer, A. M. Sidebottom, C. S. Henry, P. A. Rice, J. Bergelson, E. Chang

This study tracks genetic and metabolic changes in Bacteroides thetaiotaomicron during gut colonization, showing shifting gene usage and highlighting the importance of carbohydrate metabolism for long-term persistence.

bioRxiv · Feb 23, 2022 · PreprintMicrobiology

Metabolite Damage and Damage-Control in a Minimal Genome

D. Haas, A. M. Thamm, J. Sun, L. Huang, L. Sun, G. A. W. Beaudoin, K. S. Wise, C. Lerma-Ortiz, S. D. Bruner, M. Breuer, Z. Luthey-Schulten, J. Lin, M. A. Wilson, G. Brown, A. F. Yakunin, , V. de Crecy-Lagard

The paper identifies and validates genes involved in metabolite damage repair and preemption in the minimized Mycoplasma JCVI-Syn3A genome and extends its metabolic map.

bioRxiv · Dec 1, 2021Microbiology

Metabolic multi-stability and hysteresis in a model aerobe-anaerobe microbiome community

T. Khazaei, R. L. Williams, S. R. Bogatyrev, J. C. Doyle, C. S. Henry, R. F. Ismagilov

The paper shows that multi-stability and hysteresis explain shifts to and persistence of aerobe-anaerobe microbiome states under changing oxygen and nutrient conditions.

bioRxiv · Feb 28, 2020Ecology