Author

J. Burns

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 3 Biochemistry· 1 Ecology· 1 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 4 Assay:proteomics· 4 Approach:statistical model· 4 Research Focus:cell type annotation· 3 Research Focus:differential expression· 3 Approach:experimental assay· 3 Research Focus:cell-cell communication· 2 Organism:mouse· 2

Frequent Co-Authors

P. H. Huang· 3 shared A. Arthur· 2 shared C. Wilding· 2 shared K. Thway· 2 shared M. Chadha· 2 shared R. Jones· 2 shared A. Gronchi· 1 shared A. Jenks· 1 shared

Activity by Year

2018-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 28 mutual co-author links

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3 shared papersCancer Biology

P. H. Huang

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

Proteomic Features of Adolescents and Young Adults with Soft Tissue Tumours

Y. B. Tam, K. Low, H. PS, M. Chadha, J. Burns, C. Wilding, A. Arthur, T. Chen, K. Thway, A. Sadanandam, R. Jones, P. H. Huang

This study compares proteomic profiles of adolescents and young adults with soft tissue tumours to older adults, identifying age-specific molecular features and potential therapeutic targets.

bioRxiv · Nov 18, 2023Cancer Biology

Proteomic characterisation of Sarculator nomogram-defined risk groups in soft tissue sarcomas of the extremities and trunk wall

M. Chadha, S. Iadecola, A. Jenks, J. Burns, A. Arthur, V. Pankova, C. Wilding, D. Callegaro, D. Strauss, K. Thway, A. Gronchi, R. Jones, R. Miceli, S. Pasquali, P. H. Huang

This study identifies a DNA replication protein signature (SPM6) that improves risk stratification in soft tissue sarcomas when combined with the Sarculator nomogram.

bioRxiv · Nov 14, 2023 · PreprintCancer Biology

Pancreatic ductal adenocarcinoma cells employ integrin α6β4 to form hemidesmosomes and regulate cell proliferation

J. D. Humphries, J. Zha, J. Burns, J. A. Askari, C. R. Below, M. R. Chastney, M. C. Jones, A. Mironov, D. Knight, D. A. O'Reilly, M. J. Dunne, D. R. Garrod, C. Jorgensen, M. J. Humphries

This study identifies integrin α6β4 and hemidesmosomes as critical for PDAC cell proliferation and ECM organization, with implications for therapeutic targeting.

bioRxiv · Aug 19, 2021Cancer Biology

Feeding habits and novel prey of larval fishes in the northern San Francisco Estuary

M. J. Jungbluth, J. Burns, L. Grimaldo, A. Slaughter, A. Katla, W. Kimmerer

This study uses DNA metabarcoding to analyze the diets of larval longfin smelt and Pacific herring in the San Francisco Estuary, revealing overlapping prey resources and identifying novel prey species.

bioRxiv · Oct 18, 2020Ecology

A mouse SWATH-MS reference spectral library enables deconvolution of species-specific proteomic alterations in human tumour xenografts

L. Krasny, P. Bland, J. Burns, N. C. Lima, P. T. Harrison, L. Pacini, M. L. Elms, J. Ning, V. G. Martinez, Y.-R. Yu, S. E. Acton, P.-C. Ho, F. Calvo, A. Swain, B. A. Howard, , P. H. Huang

The paper develops a mouse SWATH-MS spectral library and a deconvolution method to analyze proteomic changes in human tumor xenografts, revealing host-tumor interactions.

bioRxiv · Feb 3, 2020Biochemistry

The aphelid-like phagotrophic origins of fungi

G. Torruella, X. Grau-Bove, D. Moreira, S. A. Karpov, J. Burns, A. Sebe-Pedros, E. Volcker, P. Lopez-Garcia

This study generates transcriptome data for an aphelid and uses phylogenomic analysis to suggest fungi evolved from a phagotrophic opisthosporidian ancestor.

bioRxiv · Aug 17, 2018Evolutionary Biology